XomeDxSlice Tool

Now Available - NEW XomeDxSlice Xpanded – Custom slice testing with trio analysis for lists >150 genes.

INSTRUCTIONS (AND TIPS)

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SELECTED GENES FOR YOUR SLICE

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Phenotypes
Ureteropelvic junction obstruction

Select all: Gene symbolChrAvg % covered at 10xLocus TypeNoteOMIMPrevious symbol(s)Phenotype(s)Slice(s)
DHCR711q13.4100%gene with protein product602858SLOS2-3 toe syndactyly; Abnormal dermatoglyphics; Abnormal lung lobation; Abnormality of dental morphology; Abnormality of the larynx; Abnormality of the metacarpal bones; Aganglionic megacolon; Aggressive behavior; Ambiguous genitalia; Anteverted nares; Aplasia/Hypoplasia of the cerebellum; Atrial septal defect; Atrioventricular canal defect; Attention deficit hyperactivity disorder; Autism; Autosomal recessive inheritance; Bicornuate uterus; Bifid scrotum; Biparietal narrowing; Breech presentation; Broad alveolar ridges; Cataract; Cholestatic liver disease; Cleft palate; Clitoral hypertrophy; Coarctation of aorta; Constipation; Cryptorchidism; Cutaneous photosensitivity; Cutis marmorata; Dandy-Walker malformation; Decreased fetal movement; Dental crowding; Depressed nasal bridge; Eczema; Elevated 7-dehydrocholesterol; Epicanthus; Epiphyseal stippling; Excessive daytime somnolence; Facial capillary hemangioma; Failure to thrive; Feeding difficulties in infancy; Gastroesophageal reflux; Gastrointestinal dysmotility; Generalized hypotonia; Gingival overgrowth; Global developmental delay; Hammertoe; Hearing impairment; Hip dislocation; Hip subluxation; Holoprosencephaly; Hydrocephalus; Hydronephrosis; Hyperactivity; Hypertelorism; Hypertonia; Hypocholesterolemia; Hypoplasia of penis; Hypoplasia of the corpus callosum; Hypoplasia of the frontal lobes; Hypospadias; Increased nuchal translucency; Intellectual disability; Intestinal malrotation; Intrauterine growth retardation; Long philtrum; Low-set ears; Low-set, posteriorly rotated ears; Metatarsus adductus; Microcephaly; Microglossia; Micrognathia; Micromelia; Micropenis; Muscular hypotonia; Narrow forehead; Nystagmus; Overlapping toe; Patent ductus arteriosus; Periventricular gray matter heterotopia; Polyhydramnios; Poor suck; Postaxial foot polydactyly; Postaxial hand polydactyly; Posteriorly rotated ears; Precocious puberty; Premature birth; Proximal placement of thumb; Ptosis; Pulmonary hypoplasia; Pyloric stenosis; Recurrent infections; Recurrent otitis media; Renal agenesis; Renal cyst; Renal hypoplasia; Scrotal hypoplasia; Seizures; Self-injurious behavior; Self-mutilation; Septate vagina; Severe photosensitivity; Short neck; Short stature; Short thumb; Short toe; Sleep-wake cycle disturbance; Strabismus; Talipes calcaneovalgus; Tracheal stenosis; Ureteropelvic junction obstruction; Ventricular septal defect; Ventriculomegaly; Vomiting; Wide intermamillary distance; Wide mouth; Wide nasal bridgeDisorders of Sex Development
DSTYK1q32.1100%gene with protein product612666RIPK5Autosomal dominant inheritance; Autosomal recessive inheritance; Babinski sign; Cognitive impairment; Congenital onset; Hyperpigmentation in sun-exposed areas; Hyperreflexia; Incomplete penetrance; Lower limb muscle weakness; Microcephaly; Micrognathia; Narrow face; Premature graying of body hair; Retrognathia; Spastic paraplegia; Stage 5 chronic kidney disease; Ureteropelvic junction obstruction; Vesicoureteral reflux; VitiligoCongenital Kidney and Urinary Tract (CKUT) Anomalies; Palmoplantar keratoderma plus congenital ichthyosis
HNF1B17q12100%gene with protein product189907TCF2Atretic vas deferens; Autosomal dominant inheritance; Biliary tract abnormality; Cerebral cortical atrophy; Decreased numbers of nephrons; Diabetes mellitus; Elevated hepatic transaminases; Elevated serum creatinine; Epididymal cyst; Glucose intolerance; Glycosuria; Gout; Hypospadias; Insulin resistance; Late onset; Multicystic kidney dysplasia; Nephrolithiasis; Onset; Phenotypic variability; Proteinuria; Reduced sperm motility; Short stature; Stage 5 chronic kidney disease; Type II diabetes mellitus; Ureteropelvic junction obstructionCongenital Kidney and Urinary Tract (CKUT) Anomalies
HOXA137p15.299.57%gene with protein product142959HOX1J, HOX1Abnormal dermatoglyphics; Autosomal dominant inheritance; Bicornuate uterus; Bifid scrotum; Brachydactyly; Chordee; Clinodactyly of the 5th finger; Delayed ossification of carpal bones; Delayed tarsal ossification; Glandular hypospadias; Hallux varus; Hypoplastic fifth toenail; Hypospadias; Longitudinal vaginal septum; Micropenis; Postaxial hand polydactyly; Proximal placement of thumb; Pseudoepiphyses; Recurrent urinary tract infections; Renal insufficiency; Short 1st metacarpal; Short 2nd toe; Short 5th finger; Short distal phalanx of finger; Short first metatarsal; Short hallux; Shortening of all middle phalanges of the fingers; Small thenar eminence; Synostosis of carpal bones; Ulnar deviation of the 2nd finger; Ureteropelvic junction obstruction; Uterus didelphys; Vesicoureteral refluxDisorders of Sex Development
HOXA137p15.299.57%gene with protein product142959HOX1J, HOX1Abnormal dermatoglyphics; Autosomal dominant inheritance; Bicornuate uterus; Bifid scrotum; Brachydactyly; Chordee; Clinodactyly of the 5th finger; Delayed ossification of carpal bones; Delayed tarsal ossification; Glandular hypospadias; Hallux varus; Hypoplastic fifth toenail; Hypospadias; Longitudinal vaginal septum; Micropenis; Postaxial hand polydactyly; Proximal placement of thumb; Pseudoepiphyses; Recurrent urinary tract infections; Renal insufficiency; Short 1st metacarpal; Short 2nd toe; Short 5th finger; Short distal phalanx of finger; Short first metatarsal; Short hallux; Shortening of all middle phalanges of the fingers; Small thenar eminence; Synostosis of carpal bones; Ulnar deviation of the 2nd finger; Ureteropelvic junction obstruction; Uterus didelphys; Vesicoureteral refluxDisorders of Sex Development
HOXD132q31.1100%gene with protein product142989HOX4I, SPD2-3 toe syndactyly; 2nd-5th toe middle phalangeal hypoplasia; 3-4 finger syndactyly; 3-4 toe syndactyly; 4-5 toe syndactyly; 6 metacarpals; Abnormal cardiac septum morphology; Abnormal vertebral morphology; Abnormality of the nasopharynx; Abnormality of the ribs; Abnormality of the sternum; Absent distal interphalangeal creases; Absent radius; Anal atresia; Aplasia/Hypoplasia of the lungs; Aplasia/Hypoplasia of the radius; Autosomal dominant inheritance; Brachydactyly; Broad distal phalanx of the hallux; Broad distal phalanx of the thumb; Broad hallux; Camptodactyly; Camptodactyly of finger; Carpal synostosis; Choanal atresia; Clinodactyly of the 5th finger; Congenital diaphragmatic hernia; Contracture of the proximal interphalangeal joint of the 5th finger; Cutaneous finger syndactyly; Ectopic kidney; Enlarged proximal interphalangeal joints; Esophageal atresia; Failure to thrive; Finger syndactyly; Fused fourth and fifth metacarpals; Hallux valgus; Hydronephrosis; Hypoplasia of the radius; Hypospadias; Intrauterine growth retardation; Joint contracture of the hand; Joint hyperflexibility; Large fontanelles; Laryngeal stenosis; Laryngomalacia; Mesoaxial hand polydactyly; Metacarpal synostosis; Metatarsal synostosis; Moderately short stature; Multiple impacted teeth; Occipital encephalocele; Oligodactyly; Patent ductus arteriosus; Patent urachus; Polyhydramnios; Postaxial foot polydactyly; Postnatal growth retardation; Preaxial polydactyly; Premature birth; Radioulnar synostosis; Renal agenesis; Renal dysplasia; Round face; Scoliosis; Short 5th metacarpal; Short clavicles; Short distal phalanx of finger; Short fifth metatarsal; Short metacarpal; Short metatarsal; Short middle phalanx of the 2nd finger; Short middle phalanx of the 5th finger; Short phalanx of finger; Short stature; Short thumb; Single umbilical artery; Spina bifida; Sporadic; Straight clavicles; Symphalangism affecting the phalanges of the hand; Syndactyly; Tethered cord; Tetralogy of Fallot; Toe syndactyly; Tracheal stenosis; Tracheoesophageal fistula; Transposition of the great arteries; Triphalangeal thumb; Type D brachydactyly; Type E brachydactyly; Ulnar deviation of finger; Ureteropelvic junction obstruction; Ventricular septal defect; Vertebral segmentation defect; Vesicoureteral reflux; Y-shaped metacarpalsHeterotaxy ; VACTERL Association
KDM6AXp11.399.9%gene with protein product300128UTXAbnormal cardiac septum morphology; Abnormal dermatoglyphics; Abnormal vertebral morphology; Abnormality of the breast; Abnormality of the dentition; Anal atresia; Anal stenosis; Anoperineal fistula; Atrial septal defect; Autoimmune thrombocytopenia; Autosomal dominant inheritance; Behavioral abnormality; Blue sclerae; Broad nasal tip; Butterfly vertebrae; Cafe-au-lait spot; Central hypotonia; Cerebral cortical atrophy; Cleft palate; Coarctation of aorta; Conductive hearing impairment; Congenital hip dislocation; Congenital hypothyroidism; Crossed fused renal ectopia; Cryptorchidism; Decreased body weight; Dental malocclusion; Depressed nasal tip; Eversion of lateral third of lower eyelids; Failure to thrive; Feeding difficulties; Feeding difficulties in infancy; Generalized hypotonia; Generalized joint laxity; Global developmental delay; Hearing impairment; Hemivertebrae; Hemolytic anemia; High palate; Highly arched eyebrow; Hirsutism; Hydrocephalus; Hypodontia; Intellectual disability; Intestinal malrotation; Joint hyperflexibility; Joint hypermobility; Long eyelashes; Long palpebral fissure; Macrotia; Malabsorption; Microcephaly; Microdontia; Micropenis; Muscular hypotonia; Neonatal hypoglycemia; Posteriorly rotated ears; Postnatal growth retardation; Preauricular pit; Premature thelarche; Prominent eyelashes; Prominent fingertip pads; Protruding ear; Ptosis; Recurrent aspiration pneumonia; Recurrent infections; Recurrent otitis media; Scoliosis; Seizures; Sensorineural hearing impairment; Short 5th finger; Short columella; Short middle phalanx of finger; Short stature; Sparse and thin eyebrow; Sparse lateral eyebrow; Strabismus; Ureteropelvic junction obstruction; Ventricular septal defect; Ventriculomegaly; Wide nasal bridge; Widely spaced teeth; X-linked dominant inheritance
KMT2D12q13.12100%gene with protein product602113TNRC21, MLL2Abnormal cardiac septum morphology; Abnormal dermatoglyphics; Abnormal vertebral morphology; Abnormality of the dentition; Anal atresia; Anal stenosis; Anoperineal fistula; Atrial septal defect; Autoimmune thrombocytopenia; Autosomal dominant inheritance; Blue sclerae; Butterfly vertebrae; Cafe-au-lait spot; Cerebral cortical atrophy; Cleft palate; Coarctation of aorta; Conductive hearing impairment; Congenital hip dislocation; Congenital hypothyroidism; Crossed fused renal ectopia; Cryptorchidism; Depressed nasal tip; Eversion of lateral third of lower eyelids; Failure to thrive; Feeding difficulties; Feeding difficulties in infancy; Generalized hypotonia; Global developmental delay; Hearing impairment; Hemivertebrae; Hemolytic anemia; High palate; Highly arched eyebrow; Hirsutism; Hydrocephalus; Hypodontia; Intellectual disability; Intestinal malrotation; Joint hyperflexibility; Joint hypermobility; Long eyelashes; Long palpebral fissure; Macrotia; Malabsorption; Microcephaly; Microdontia; Micropenis; Muscular hypotonia; Posteriorly rotated ears; Postnatal growth retardation; Preauricular pit; Premature thelarche; Prominent eyelashes; Prominent fingertip pads; Protruding ear; Ptosis; Recurrent aspiration pneumonia; Recurrent infections; Recurrent otitis media; Scoliosis; Seizures; Sensorineural hearing impairment; Short 5th finger; Short columella; Short middle phalanx of finger; Short stature; Sparse and thin eyebrow; Sparse lateral eyebrow; Strabismus; Ureteropelvic junction obstruction; Ventricular septal defect; Ventriculomegaly; Wide nasal bridge; Widely spaced teeth
PIGL17p11.2100%gene with protein product605947Abnormal dermatoglyphics; Abnormality of epiphysis morphology; Abnormality of the outer ear; Acute lymphoblastic leukemia; Aplasia/Hypoplasia of the nipples; Aplasia/Hypoplasia of the phalanges of the hand; Aplasia/Hypoplasia of the phalanges of the toes; Aplastic clavicles; Autosomal recessive inheritance; Brachycephaly; Broad-based gait; Cerebral atrophy; Cleft palate; Clinodactyly of the 5th finger; Conductive hearing impairment; Corneal opacity; Depressed nasal bridge; Depressed nasal ridge; Duplicated collecting system; Epicanthus; Erythema; Fine hair; Frontal bossing; Generalized hypotonia; Hearing impairment; Hydronephrosis; Hypertelorism; Hypodontia; Hypoplastic nipples; Ichthyosis; Increased number of teeth; Intellectual disability; Joint contracture of the hand; Large for gestational age; Large hands; Long foot; Low-set nipples; Microdontia; Overfolded helix; Palmoplantar hyperkeratosis; Peripheral pulmonary artery stenosis; Prominent forehead; Ptosis; Pulmonary valve atresia; Retinal coloboma; Seizures; Short foot; Short palm; Short philtrum; Sparse hair; Strabismus; Tall stature; Tetralogy of Fallot; Thick lower lip vermilion; Thick vermilion border; Transposition of the great arteries; Upslanted palpebral fissure; Ureteropelvic junction obstruction; Ventricular septal defect; Violent behavior; Webbed neck; Wide mouth; Wide nasal bridge; Widely spaced teethEctodermal Dysplasia ; Palmoplantar keratoderma plus congenital ichthyosis
SLC26A14p16.3100%gene with protein product610130Acute kidney injury; Autosomal recessive inheritance; Calcium oxalate nephrolithiasis; Hyperoxaluria; Ureteropelvic junction obstruction
TBX186q14.3100%gene with protein product604613Autosomal dominant inheritance; Congenital megaureter; Cystic renal dysplasia; Flank pain; Hydronephrosis; Hydroureter; Multicystic kidney dysplasia; Nephrotic syndrome; Phenotypic variability; Renal dysplasia; Renal hypoplasia; Renal sarcoma; Ureteropelvic junction obstruction


The gene coverage data provided by GeneDx represent an estimate based on previous results, but the specific sequencing coverage data for the genes selected may vary from individual to individual, and cannot be predicted exactly. Changes to an approved gene list can only be made by contacting GeneDx directly at 888-729-1206 and asking to speak with a member of our Whole Exome Sequencing Laboratory.


  SUGGESTED CUSTOM SLICES  

Customize below OR enter Suggested Slice ID on printed requisition form
(e.g. 706 XomeDxSlice - Slice ID: CS-Albinism).

Suggested Slice IDSuggested Gene List Name
CS-AlbinismAlbinism
CS-AAAplastic Anemia
CS-AutoImmuneAutoimmune Disorders
CS-BBSBardet-Biedl Syndrome
CS-BMFBone Marrow Failure Syndromes
CS-CVIDCommon Variable Immune Deficiency
CS-CKUTCongenital Kidney and Urinary Tract (CKUT) Anomalies
CS-DSDDisorders of Sex Development
CS-EDEctodermal Dysplasia
CS-FAFanconi Anemia
CS-AnemiaHemolytic Anemia
CS-HeterotaxyHeterotaxy
CS-IBDInflammatory Bowel Disease
CS-MaleInfMale Infertility
CS-WWSMuscular dystropy-dystroglycanopathy (Walker-Warburg)
CS-NephroticNephrotic Syndrome
CS-ObesityObesity
CS-PPKCIPalmoplantar keratoderma plus congenital ichthyosis
CS-Primary ImmunodefPrimary Immunodeficiency
CS-RhabdoRhabdomyolysis
CS-SRTDShort-Rib Thoracic Dysplasia
CS-VACTERLVACTERL Association
CS-WSWaardenburg Syndrome