XomeDxSlice Tool

Now Available - NEW XomeDxSlice Xpanded – Custom slice testing with trio analysis for lists >150 genes.

INSTRUCTIONS (AND TIPS)

ENTER GENES BELOW AND CLICK "ADD GENES TO SLICE"

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SEARCH BY GENE SYMBOL OR PHENOTYPE (HPO TERM)

You may also use this search to review average exome sequencing coverage by entering the gene symbol below.

SELECTED GENES FOR YOUR SLICE

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Phenotypes
Tetraplegia

Select all: Gene symbolChrAvg % covered at 10xLocus TypeNoteOMIMPrevious symbol(s)Phenotype(s)Slice(s)
ALS22q33.1100%gene with protein product606352ALS2CR6Abnormal lower motor neuron morphology; Abnormal pyramidal signs; Abnormal upper motor neuron morphology; Abnormality of eye movement; Abnormality of the corticospinal tract; Abnormality of the eye; Abnormality of the face; Achilles tendon contracture; Amyotrophic lateral sclerosis; Anarthria; Autosomal recessive inheritance; Babinski sign; Cerebral cortical atrophy; Chewing difficulties; Childhood onset; Decreased muscle mass; Difficulty in tongue movements; Distal amyotrophy; Drooling; Dysarthria; Dysphagia; EMG abnormality; EMG: chronic denervation signs; Gait disturbance; Gait imbalance; Hand muscle atrophy; Hyperreflexia; Infantile onset; Juvenile onset; Loss of speech; Lower limb spasticity; Motor delay; Muscle weakness; Pes cavus; Progressive; Pseudobulbar behavioral symptoms; Saccadic smooth pursuit; Scoliosis; Slow progression; Slow saccadic eye movements; Spastic dysarthria; Spastic gait; Spastic paraplegia; Spastic tetraparesis; Spastic tetraplegia; Spasticity; Spasticity of facial muscles; Spasticity of pharyngeal muscles; Tetraplegia; Upper limb spasticity; Urinary incontinence
ALS22q33.1100%gene with protein product606352ALS2CR6Abnormal lower motor neuron morphology; Abnormal pyramidal signs; Abnormal upper motor neuron morphology; Abnormality of eye movement; Abnormality of the corticospinal tract; Abnormality of the eye; Abnormality of the face; Achilles tendon contracture; Amyotrophic lateral sclerosis; Anarthria; Autosomal recessive inheritance; Babinski sign; Cerebral cortical atrophy; Chewing difficulties; Childhood onset; Decreased muscle mass; Difficulty in tongue movements; Distal amyotrophy; Drooling; Dysarthria; Dysphagia; EMG abnormality; EMG: chronic denervation signs; Gait disturbance; Gait imbalance; Hand muscle atrophy; Hyperreflexia; Infantile onset; Juvenile onset; Loss of speech; Lower limb spasticity; Motor delay; Muscle weakness; Pes cavus; Progressive; Pseudobulbar behavioral symptoms; Saccadic smooth pursuit; Scoliosis; Slow progression; Slow saccadic eye movements; Spastic dysarthria; Spastic gait; Spastic paraplegia; Spastic tetraparesis; Spastic tetraplegia; Spasticity; Spasticity of facial muscles; Spasticity of pharyngeal muscles; Tetraplegia; Upper limb spasticity; Urinary incontinence
ARSA22q13.33100%gene with protein product607574Abnormality of the cerebral white matter; Ataxia; Autosomal recessive inheritance; Babinski sign; Bulbar palsy; Cholecystitis; Chorea; Decreased nerve conduction velocity; Delusions; Dysarthria; Dystonia; EMG: neuropathic changes; Emotional lability; Gait disturbance; Gallbladder dysfunction; Generalized hypotonia; Hallucinations; Hyperreflexia; Hyporeflexia; Increased CSF protein; Intellectual disability; Loss of speech; Mental deterioration; Optic atrophy; Peripheral demyelination; Progressive peripheral neuropathy; Seizures; Spastic tetraplegia; Tetraplegia; Urinary incontinence
ARXXp21.399.72%gene with protein product300382MRXS1, PRTS, MRX76, MRX54, MRX43, MRX36, MRX29, MRX32, MRX33, MRX38, MRX87Abnormal hair pattern; Abnormality of skin morphology; Abnormality of the hip bone; Abnormally large globe; Agenesis of corpus callosum; Ambiguous genitalia; Broad alveolar ridges; Choreoathetosis; Coarse facial features; Cryptorchidism; Death in infancy; Decreased testicular size; Delayed speech and language development; Developmental regression; Diarrhea; Duane anomaly; Dysarthria; Dysphagia; Dyspnea; Dystonia; EEG abnormality; Epileptic encephalopathy; Feeding difficulties in infancy; Flexion contracture; Focal dystonia; Generalized hirsutism; Generalized hypotonia; Generalized myoclonic seizures; Gliosis; Global developmental delay; Hemiplegia; High forehead; High palate; Hirsutism; Hyperconvex nail; Hyperreflexia; Hypohidrosis; Hypoplasia of penis; Hypospadias; Hypsarrhythmia; Infantile spasms; Intellectual disability; Intellectual disability, progressive; Intellectual disability, severe; Limb dystonia; Limb joint contracture; Lissencephaly; Long philtrum; Long upper lip; Low anterior hairline; Low-set ears; Lower limb spasticity; Malabsorption; Microcephaly; Micrognathia; Micropenis; Muscle stiffness; Muscular hypotonia; Muscular hypotonia of the trunk; Myoclonus; Neonatal hypotonia; Nystagmus; Optic atrophy; Overlapping toe; Pachygyria; Profound global developmental delay; Prominent nasal bridge; Prominent supraorbital ridges; Protruding ear; Renal dysplasia; Rigidity; Scoliosis; Seizures; Severe global developmental delay; Short stature; Spastic tetraplegia; Spasticity; Specific learning disability; Status epilepticus; Strabismus; Synophrys; Tapered finger; Tetraplegia; Thin upper lip vermilion; Triangular face; Ventriculomegaly; Visual impairment; Wide anterior fontanel; Wide nasal bridge; X-linked inheritance; X-linked recessive inheritanceDisorders of Sex Development; Obesity
BCAP31Xq2899.99%gene with protein product300398Abnormal facial shape; Abnormal pyramidal signs; Cerebellar atrophy; Cerebral atrophy; Cerebral hypomyelination; CNS hypomyelination; Dystonia; Failure to thrive; Global developmental delay; Intellectual disability; Intellectual disability, severe; Microcephaly; Sensorineural hearing impairment; Strabismus; Tetraplegia; X-linked recessive inheritance
CACNA1S1q32.1100%gene with protein product114208HOKPP, MHS5, CACNL1A3Autosomal dominant inheritance; Constipation; Decreased urinary potassium; EMG abnormality; Episodic flaccid weakness; Episodic hypokalemia; Exercise-induced muscle fatigue; Graves disease; Hyperhidrosis; Hypokalemia; Hypomagnesemia; Hyporeflexia; Incomplete penetrance; Increased intramyocellular lipid droplets; Lower limb muscle weakness; Mildly elevated creatine phosphokinase; Muscle cramps; Muscle stiffness; Obesity; Palpitations; Periodic hyperkalemic paralysis; Periodic hypokalemic paresis; Postprandial hyperglycemia; Rhabdomyolysis; Tetraplegia; Thyrotoxicosis with toxic multinodular goitre; Thyrotoxicosis with toxic single thyroid nodule; Transient hypophosphatemia; Tremor; Urinary retention; Weight loss
DPYD1p21.399.97%gene with protein productXomeDxSlice is not appropriate for pharmacogenomic analysis of this gene. 612779Abnormal eating behavior; Abnormality of vision; Astigmatism; Autism; Autistic behavior; Autosomal recessive inheritance; Broad nasal tip; Cerebral atrophy; Coloboma; Deeply set eye; Delayed speech and language development; Failure to thrive; Full cheeks; Generalized hypotonia; Global developmental delay; Growth delay; Hyperactivity; Hypertonia; Intellectual disability; Intellectual disability, mild; Lethargy; Long ear; Macrocephaly; Microcephaly; Microphthalmia; Motor delay; Myopia; Nystagmus; Obesity; Optic atrophy; Phenotypic variability; Reduced dihydropyrimidine dehydrogenase activity; Seizures; Short nose; Shyness; Tetraplegia; Upslanted palpebral fissure
GABRA3Xq2899.99%gene with protein product305660Constipation; Decreased urinary potassium; EMG abnormality; Episodic flaccid weakness; Episodic hypokalemia; Exercise-induced muscle fatigue; Graves disease; Hyperhidrosis; Hypomagnesemia; Hyporeflexia; Increased intramyocellular lipid droplets; Lower limb muscle weakness; Mildly elevated creatine phosphokinase; Muscle cramps; Muscle stiffness; Obesity; Palpitations; Periodic hypokalemic paresis; Postprandial hyperglycemia; Rhabdomyolysis; Tetraplegia; Thyrotoxicosis with toxic multinodular goitre; Thyrotoxicosis with toxic single thyroid nodule; Transient hypophosphatemia; Tremor; Urinary retention; Weight loss
KCNJ1817p11.2100%gene with protein productXomeDxSlice is not appropriate.613236Constipation; Decreased urinary potassium; EMG abnormality; Episodic flaccid weakness; Episodic hypokalemia; Exercise-induced muscle fatigue; Graves disease; Hyperhidrosis; Hypomagnesemia; Hyporeflexia; Increased intramyocellular lipid droplets; Lower limb muscle weakness; Mildly elevated creatine phosphokinase; Muscle cramps; Muscle stiffness; Obesity; Palpitations; Periodic hypokalemic paresis; Postprandial hyperglycemia; Rhabdomyolysis; Tetraplegia; Thyrotoxicosis with toxic multinodular goitre; Thyrotoxicosis with toxic single thyroid nodule; Transient hypophosphatemia; Tremor; Urinary retention; Weight loss
KCNT19q34.399.94%gene with protein product608167Autosomal dominant inheritance; Cerebral cortical atrophy; Clonus; Cognitive impairment; Depressivity; Developmental regression; Epileptic encephalopathy; Focal seizures; Generalized hypotonia; Gliosis; Hypoplasia of the corpus callosum; Microcephaly; Neuronal loss in central nervous system; Progressive; Spasticity; Status epilepticus; Tetraplegia
NADK25p13.299.99%gene with protein product615787C5orf33, NADKD1Autosomal recessive inheritance; Cerebral atrophy; Choreoathetosis; Cortical visual impairment; Death in infancy; Decreased plasma free carnitine; Dystonia; Encephalopathy; Failure to thrive; Global developmental delay; Hyperlysinemia; Leukodystrophy; Microcephaly; Muscular hypotonia; Neonatal hypotonia; Nystagmus; Seizures; Spasticity; Tetraplegia; Ventriculomegaly
PNKP19q13.3399.82%gene with protein product605610Areflexia; Ataxia; Autosomal recessive inheritance; Cerebellar atrophy; Cortical gyral simplification; Dystonia; Epileptic encephalopathy; Generalized hypotonia; Hyperactivity; Hypoplasia of the corpus callosum; Intellectual disability, severe; Motor delay; Oculomotor apraxia; Peripheral neuropathy; Progressive microcephaly; Rapidly progressive; Seizures; Skeletal muscle atrophy; Tetraplegia; Ventriculomegaly
PRF110q22.1100%gene with protein product170280Anemia; Aplastic anemia; Ataxia; Autosomal recessive inheritance; Bone marrow hypocellularity; Coma; CSF pleocytosis; Encephalitis; Failure to thrive; Generalized edema; Generalized hypotonia; Global developmental delay; Hemiplegia; Hemophagocytosis; Hepatomegaly; Hypertonia; Hypertriglyceridemia; Hypoalbuminemia; Hypofibrinogenemia; Hyponatremia; Hypoproteinemia; Increased CSF protein; Increased intracranial pressure; Increased serum ferritin; Increased total bilirubin; Irritability; Jaundice; Leukopenia; Lymphadenopathy; Lymphoma; Meningitis; Prolonged prothrombin time; Seizures; Splenomegaly; Tetraplegia; ThrombocytopeniaAutoimmune Disorders ; Bone Marrow Failure Syndromes ; Primary Immunodeficiency
PRPS1Xq22.399.96%gene with protein product311850DFN2Abnormal nerve conduction velocity; Absent speech; Areflexia; Areflexia of lower limbs; Ataxia; Childhood onset; Death in infancy; Decreased nerve conduction velocity; Distal amyotrophy; Distal muscle weakness; Distal sensory impairment; Drooling; Dysphagia; Gait disturbance; Generalized hypotonia; Global developmental delay; Gout; Growth delay; Hearing impairment; Hyperuricosuria; Immunodeficiency; Impaired pain sensation; Intellectual disability; Motor delay; Muscle mounding; Muscle weakness; Muscular hypotonia; Neonatal hypotonia; Nystagmus; Onion bulb formation; Optic atrophy; Peripheral neuropathy; Pes cavus; Polyneuropathy; Progressive muscle weakness; Progressive visual loss; Recurrent infections; Recurrent upper respiratory tract infections; Renal insufficiency; Respiratory insufficiency; Segmental peripheral demyelination/remyelination; Seizures; Sensorineural hearing impairment; Sensory neuropathy; Skeletal muscle hypertrophy; Spinal cord posterior columns myelin loss; Tetraplegia; Uric acid nephrolithiasis; Variable expressivity; Visual impairment; Visual loss; X-linked recessive inheritance
PRPS1Xq22.399.96%gene with protein product311850DFN2Abnormal nerve conduction velocity; Absent speech; Areflexia; Areflexia of lower limbs; Ataxia; Childhood onset; Death in infancy; Decreased nerve conduction velocity; Distal amyotrophy; Distal muscle weakness; Distal sensory impairment; Drooling; Dysphagia; Gait disturbance; Generalized hypotonia; Global developmental delay; Gout; Growth delay; Hearing impairment; Hyperuricosuria; Immunodeficiency; Impaired pain sensation; Intellectual disability; Motor delay; Muscle mounding; Muscle weakness; Muscular hypotonia; Neonatal hypotonia; Nystagmus; Onion bulb formation; Optic atrophy; Peripheral neuropathy; Pes cavus; Polyneuropathy; Progressive muscle weakness; Progressive visual loss; Recurrent infections; Recurrent upper respiratory tract infections; Renal insufficiency; Respiratory insufficiency; Segmental peripheral demyelination/remyelination; Seizures; Sensorineural hearing impairment; Sensory neuropathy; Skeletal muscle hypertrophy; Spinal cord posterior columns myelin loss; Tetraplegia; Uric acid nephrolithiasis; Variable expressivity; Visual impairment; Visual loss; X-linked recessive inheritance
TFG3q12.2100%gene with protein product602498Abnormal myelination; Abnormality of peripheral nerve conduction; Abnormality of the Achilles tendon; Adult onset; Autosomal dominant inheritance; Autosomal recessive inheritance; Babinski sign; Decreased number of peripheral myelinated nerve fibers; Degeneration of anterior horn cells; Difficulty climbing stairs; Difficulty standing; Distal lower limb amyotrophy; Distal sensory impairment; Fasciculations; Gait disturbance; Gliosis; Hyperlipidemia; Hyperreflexia; Inability to walk; Mildly elevated creatine phosphokinase; Motor polyneuropathy; Optic atrophy; Peripheral neuropathy; Proximal amyotrophy; Proximal muscle weakness; Sensorimotor neuropathy; Sensory neuropathy; Slow progression; Spastic paraplegia; Tetraplegia; Visual loss


The gene coverage data provided by GeneDx represent an estimate based on previous results, but the specific sequencing coverage data for the genes selected may vary from individual to individual, and cannot be predicted exactly. Changes to an approved gene list can only be made by contacting GeneDx directly at 888-729-1206 and asking to speak with a member of our Whole Exome Sequencing Laboratory.


  SUGGESTED CUSTOM SLICES  

Customize below OR enter Suggested Slice ID on printed requisition form
(e.g. 706 XomeDxSlice - Slice ID: CS-Albinism).

Suggested Slice IDSuggested Gene List Name
CS-AlbinismAlbinism
CS-AAAplastic Anemia
CS-AutoImmuneAutoimmune Disorders
CS-BBSBardet-Biedl Syndrome
CS-BMFBone Marrow Failure Syndromes
CS-CVIDCommon Variable Immune Deficiency
CS-CKUTCongenital Kidney and Urinary Tract (CKUT) Anomalies
CS-DSDDisorders of Sex Development
CS-EDEctodermal Dysplasia
CS-FAFanconi Anemia
CS-AnemiaHemolytic Anemia
CS-HeterotaxyHeterotaxy
CS-IBDInflammatory Bowel Disease
CS-MaleInfMale Infertility
CS-WWSMuscular dystropy-dystroglycanopathy (Walker-Warburg)
CS-NephroticNephrotic Syndrome
CS-ObesityObesity
CS-PPKCIPalmoplantar keratoderma plus congenital ichthyosis
CS-Primary ImmunodefPrimary Immunodeficiency
CS-RhabdoRhabdomyolysis
CS-SRTDShort-Rib Thoracic Dysplasia
CS-VACTERLVACTERL Association
CS-WSWaardenburg Syndrome