XomeDxSlice Tool

Now Available - NEW XomeDxSlice Xpanded – Custom slice testing with trio analysis for lists >150 genes.



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Recurrent cutaneous abscess formation

Select all: Gene symbolChrAvg % covered at 10xLocus TypeNoteOMIMPrevious symbol(s)Phenotype(s)Slice(s)
BTKXq22.199.99%gene with protein product300300AGMX1, IMD1Abnormality of the tonsils; Agammaglobulinemia; Arthritis; Cellulitis; Chronic diarrhea; Chronic otitis media; Conjunctivitis; Cor pulmonale; Delayed skeletal maturation; Delayed speech and language development; Diarrhea; Encephalitis; Enteroviral dermatomyositis syndrome; Enteroviral hepatitis; Epididymitis; Failure to thrive; Fatigue; Fever; Glossoptosis; Growth hormone deficiency; Hearing impairment; Hypocalcemia; Immunodeficiency; Lymph node hypoplasia; Meningitis; Neoplasm; Neutropenia; Otitis media; Panhypogammaglobulinemia; Pneumonia; Prostatitis; Pyoderma; Recurrent bacterial infections; Recurrent cutaneous abscess formation; Recurrent enteroviral infections; Recurrent pneumonia; Recurrent urinary tract infections; Sensorineural hearing impairment; Sepsis; Septic arthritis; Short stature; Sinusitis; Skin rash; Skin ulcer; X-linked recessive inheritanceAutoimmune Disorders ; Inflammatory Bowel Disease ; Primary Immunodeficiency
CTSC11q14.2100%gene with protein product602365PLS, PALSAbnormality of the fingernails; Abnormality of the skin; Arachnodactyly; Atrophy of alveolar ridges; Autosomal recessive inheritance; Cerebral calcification; Choroid plexus calcification; Chronic furunculosis; Congenital palmoplantar keratosis; Gingival recession; Gingivitis; Heterogeneous; Nail dystrophy; Osteolytic defects of the phalanges of the hand; Palmoplantar hyperkeratosis; Palmoplantar keratoderma; Pes planus; Premature loss of primary teeth; Premature loss of teeth; Pustule; Recurrent bacterial skin infections; Recurrent cutaneous abscess formation; Recurrent respiratory infections; Reduced number of teeth; Severe periodontitis; Tapering pointed ends of distal finger phalanges; Thick nailPalmoplantar keratoderma plus congenital ichthyosis
LYST1q42.399.95%gene with protein product606897CHS1Abnormality of coagulation; Abnormality of multiple cell lineages in the bone marrow; Amblyopia; Anemia; Areflexia; Autosomal recessive inheritance; Bruising susceptibility; Cranial nerve paralysis; Decreased nerve conduction velocity; Edema; Epistaxis; Fever; Foot dorsiflexor weakness; Gait disturbance; Generalized hypopigmentation; Giant melanosomes in melanocytes; Gingival bleeding; Gingivitis; Global developmental delay; Hepatomegaly; Hypopigmentation of hair; Hypopigmentation of the skin; Hyporeflexia; Immunodeficiency; Intellectual disability; Iris hypopigmentation; Jaundice; Leukopenia; Lymphadenopathy; Lymphoma; Macular hypoplasia; Neurodegeneration; Neutropenia; Nystagmus; Ocular albinism; Paresthesia; Periodontitis; Peripheral neuropathy; Photophobia; Progressive peripheral neuropathy; Recurrent bacterial skin infections; Recurrent cutaneous abscess formation; Recurrent respiratory infections; Recurrent systemic pyogenic infections; Reduced visual acuity; Seizures; Skin ulcer; Splenomegaly; Strabismus; Thrombocytopenia; Tremor; Visual impairment; White hairAlbinism ; Aplastic Anemia ; Autoimmune Disorders ; Bone Marrow Failure Syndromes ; Primary Immunodeficiency
PSEN114q24.2100%gene with protein product104311AD3Abnormal brain FDG positron emission tomography; Abnormal social behavior; Abnormality of extrapyramidal motor function; Abnormality of the cerebral white matter; Acne inversa; Adult onset; Aggressive behavior; Agitation; Alexia; Alzheimer disease; Amyotrophic lateral sclerosis; Anxiety; Apathy; Apraxia; Autosomal dominant inheritance; Babinski sign; Cerebral cortical atrophy; Chronic furunculosis; Collectionism; Confusion; Congestive heart failure; Dementia; Deposits immunoreactive to beta-amyloid protein; Depressivity; Dilated cardiomyopathy; Disinhibition; Dysarthria; Dyscalculia; Dysgraphia; Dyslexia; Dysphagia; Dysphasia; Dystonia; Echolalia; EEG with continuous slow activity; Emotional blunting; Frontal lobe dementia; Frontotemporal cerebral atrophy; Frontotemporal dementia; Gait disturbance; Gliosis; Grammar-specific speech disorder; Hallucinations; Heterogeneous; Hyperorality; Hypertonia; Inappropriate behavior; Inappropriate laughter; Inappropriate sexual behavior; Irritability; Lack of insight; Language impairment; Loss of speech; Lower limb hyperreflexia; Memory impairment; Myoclonus; Neurofibrillary tangles; Neuronal loss in central nervous system; Parkinsonism; Perifolliculitis; Perseveration; Personality changes; Polyphagia; Poor speech; Primitive reflex; Rapidly progressive; Recurrent cutaneous abscess formation; Restlessness; Restrictive behavior; Seizures; Spastic tetraparesis; Spoken Word Recognition Deficit; Sporadic; Stereotypy; Syncope; Temporal cortical atrophy; Thickened nuchal skin fold
PSENEN19q13.12100%gene with protein product607632Acne inversa; Autosomal dominant inheritance; Chronic furunculosis; Perifolliculitis; Recurrent cutaneous abscess formation

The gene coverage data provided by GeneDx represent an estimate based on previous results, but the specific sequencing coverage data for the genes selected may vary from individual to individual, and cannot be predicted exactly. Changes to an approved gene list can only be made by contacting GeneDx directly at 888-729-1206 and asking to speak with a member of our Whole Exome Sequencing Laboratory.


Customize below OR enter Suggested Slice ID on printed requisition form
(e.g. 706 XomeDxSlice - Slice ID: CS-Albinism).

Suggested Slice IDSuggested Gene List Name
CS-AAAplastic Anemia
CS-AutoImmuneAutoimmune Disorders
CS-BBSBardet-Biedl Syndrome
CS-BMFBone Marrow Failure Syndromes
CS-CVIDCommon Variable Immune Deficiency
CS-CKUTCongenital Kidney and Urinary Tract (CKUT) Anomalies
CS-DSDDisorders of Sex Development
CS-EDEctodermal Dysplasia
CS-FAFanconi Anemia
CS-AnemiaHemolytic Anemia
CS-IBDInflammatory Bowel Disease
CS-MaleInfMale Infertility
CS-WWSMuscular dystropy-dystroglycanopathy (Walker-Warburg)
CS-NephroticNephrotic Syndrome
CS-PPKCIPalmoplantar keratoderma plus congenital ichthyosis
CS-Primary ImmunodefPrimary Immunodeficiency
CS-SRTDShort-Rib Thoracic Dysplasia
CS-WSWaardenburg Syndrome