XomeDxSlice Tool

Now Available - NEW XomeDxSlice Xpanded – Custom slice testing with trio analysis for lists >150 genes.

INSTRUCTIONS (AND TIPS)

ENTER GENES BELOW AND CLICK "ADD GENES TO SLICE"

If cutting and pasting from another document, please be sure to list EITHER one gene symbol per line OR enter a comma-separated list.


OR

SEARCH BY GENE SYMBOL OR PHENOTYPE (HPO TERM)

You may also use this search to review average exome sequencing coverage by entering the gene symbol below.

SELECTED GENES FOR YOUR SLICE

What do you want to do?

Place an e-order of this Slice on a specific patient through the GeneDx Portal  
Obtain a Slice ID to order testing with a printed requisition form  
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Phenotypes
Pulmonary infiltrates

Select all: Gene symbolChrAvg % covered at 10xLocus TypeNoteOMIMPrevious symbol(s)Phenotype(s)Slice(s)
APOE19q13.32100%gene with protein productSusceptibility alleles will not be reported.107741AD2Abnormality of the eye; Absent axillary hair; Alzheimer disease; Autosomal dominant inheritance; Autosomal recessive inheritance; Blepharitis; Cerebral amyloid angiopathy; Cirrhosis; Corneal arcus; Decreased circulating high-density lipoprotein levels; Dementia; Diabetes mellitus; Edema; Glomerulopathy; Hepatic steatosis; Hepatomegaly; Hypercholesterolemia; Hypertriglyceridemia; Increased circulating low-density lipoprotein levels; Late onset; Long-tract signs; Mediastinal lymphadenopathy; Mesangial hypercellularity; Middle age onset; Neurofibrillary tangles; Obesity; Parkinsonism; Petechiae; Proteinuria; Pulmonary infiltrates; Renal insufficiency; Sea-blue histiocytosis; Sleep-wake cycle disturbance; Splenomegaly; Subcutaneous nodule; Tendon xanthomatosis; Thrombocytopenia; Type IV atherosclerotic lesion; Xanthelasma
BCL101p22.3100%gene with protein product603517Anemia; Autosomal recessive inheritance; B-cell lymphoma; Constipation; Decreased antibody level in blood; Encephalitis; Fatigue; Fever; Gastric lymphoma; Hyperhidrosis; Immunodeficiency; Infantile onset; Nausea and vomiting; Pulmonary infiltrates; Recurrent infections; Seizures; Weight loss
BIRC311q22.299.94%gene with protein product601721API2Anemia; B-cell lymphoma; Constipation; Fatigue; Fever; Hyperhidrosis; Nausea and vomiting; Pulmonary infiltrates; Weight loss
CAV17q31.2100%gene with protein product601047CAVAbnormality of skin pigmentation; Abnormality of the face; Absence of subcutaneous fat; Acanthosis nigricans; Accelerated skeletal maturation; Arthralgia; Arthritis; Autoimmunity; Autosomal dominant inheritance; Autosomal recessive inheritance; Babinski sign; Bone cyst; Broad foot; Carious teeth; Clonus; Congenital cataract; Decreased adipose tissue around neck; Diabetes mellitus; Distal sensory impairment; Dysmetria; Dyspareunia; Dysphagia; Dyspnea; Flexion contracture; Gait ataxia; Gastroesophageal reflux; Generalized hirsutism; Glucose intolerance; Growth hormone excess; Hepatic failure; Hepatic steatosis; Hepatomegaly; Hepatosplenomegaly; Hirsutism; Hypercholesterolemia; Hyperhidrosis; Hyperinsulinemia; Hypertriglyceridemia; Hypertrophic cardiomyopathy; Hypocalcemia; Hypopigmented skin patches; Incomplete penetrance; Increased pulmonary vascular resistance; Insulin resistance; Intellectual disability; Lack of facial subcutaneous fat; Large hands; Lipoatrophy; Lipodystrophy; Loss of subcutaneous adipose tissue in limbs; Lower limb muscle weakness; Malabsorption; Mandibular prognathia; Mucosal telangiectasiae; Muscle weakness; Narrow foramen obturatorium; Nausea and vomiting; Nystagmus; Oliguria; Orthostatic hypotension; Osteolysis; Pancreatitis; Pigmentary retinopathy; Precocious puberty; Prominent supraorbital ridges; Pulmonary arterial hypertension; Pulmonary fibrosis; Pulmonary infiltrates; Reduced subcutaneous adipose tissue; Short stature; Skeletal muscle hypertrophy; Skin ulcer; Telangiectasia of the skin; Variable expressivity; Xerostomia
CCR66q27100%gene with protein product601835STRL22Arthralgia; Arthritis; Autoimmunity; Carious teeth; Dyspareunia; Dysphagia; Dyspnea; Flexion contracture; Gastroesophageal reflux; Hypopigmented skin patches; Malabsorption; Mucosal telangiectasiae; Muscle weakness; Narrow foramen obturatorium; Nausea and vomiting; Oliguria; Osteolysis; Pulmonary fibrosis; Pulmonary infiltrates; Skin ulcer; Telangiectasia of the skin; Xerostomia
CTGF6q23.2100%gene with protein product121009Arthralgia; Arthritis; Autoimmunity; Carious teeth; Dyspareunia; Dysphagia; Dyspnea; Flexion contracture; Gastroesophageal reflux; Hypopigmented skin patches; Malabsorption; Mucosal telangiectasiae; Muscle weakness; Narrow foramen obturatorium; Nausea and vomiting; Oliguria; Osteolysis; Pulmonary fibrosis; Pulmonary infiltrates; Skin ulcer; Telangiectasia of the skin; Xerostomia
CTLA42q33.2100%gene with protein product123890CELIAC3, IDDM12Abdominal pain; Abnormal lymphocyte morphology; Abnormality of the hypothalamus-pituitary axis; Abnormality of the oral cavity; Alopecia; Arthralgia; Autoimmune hemolytic anemia; Autoimmune thrombocytopenia; Autoimmunity; Autosomal dominant inheritance; Cerebral ischemia; Chest pain; Chronic obstructive pulmonary disease; Cough; Cutaneous T-cell lymphoma; Decreased antibody level in blood; Diarrhea; Dry skin; Eczema; Elevated C-reactive protein level; Elevated erythrocyte sedimentation rate; Epistaxis; Erythema; Erythroderma; Fatigue; Fever; Glomerulopathy; Granulomatosis; Hematuria; Hemoptysis; Hepatomegaly; Hypopigmented skin patches; Immunodeficiency; Incomplete penetrance; Inflammatory abnormality of the eye; Irregular hyperpigmentation; Lichenification; Lymphadenopathy; Nail dystrophy; Nausea and vomiting; Neoplasm of the skin; Palmoplantar keratoderma; Papule; Periorbital edema; Poikiloderma; Proteinuria; Pruritus; Pulmonary fibrosis; Pulmonary infiltrates; Recurrent intrapulmonary hemorrhage; Recurrent respiratory infections; Respiratory insufficiency; Sinusitis; Skin plaque; Skin rash; Splenomegaly; Vasculitis; Weight lossAutoimmune Disorders ; Common Variable Immune Deficiency ; Inflammatory Bowel Disease
FOXP13p1399.87%gene with protein product605515Aggressive behavior; Anemia; Autosomal dominant inheritance; B-cell lymphoma; Broad nasal tip; Constipation; Delayed gross motor development; Delayed speech and language development; Downslanted palpebral fissures; Fatigue; Fever; Generalized hypotonia; Hyperactivity; Hyperhidrosis; Hypertelorism; Intellectual disability; Macrocephaly; Nausea and vomiting; Nystagmus; Open mouth; Prominent forehead; Pulmonary infiltrates; Retrognathia; Short nose; Stereotypy; Strabismus; Weight loss
HLA-DPB16p21.3299.92%gene with protein productXomeDxSlice is not appropriate.142858HLA-DP1BAbdominal pain; Abnormality of the hypothalamus-pituitary axis; Abnormality of the oral cavity; Arthralgia; Autoimmunity; Cerebral ischemia; Chest pain; Chronic obstructive pulmonary disease; Cough; Elevated C-reactive protein level; Elevated erythrocyte sedimentation rate; Epistaxis; Fatigue; Fever; Glomerulopathy; Granulomatosis; Hematuria; Hemoptysis; Inflammatory abnormality of the eye; Nausea and vomiting; Papule; Periorbital edema; Proteinuria; Pulmonary fibrosis; Pulmonary infiltrates; Recurrent intrapulmonary hemorrhage; Recurrent respiratory infections; Respiratory insufficiency; Sinusitis; Skin rash; Vasculitis; Weight loss
HLA-DRB16p21.3297.56%gene with protein productXomeDxSlice is not appropriate.142857HLA-DR1BAbnormal blistering of the skin; Abnormal rapid eye movement sleep; Abnormality of vision; Arthralgia; Arthritis; Autoimmunity; Carious teeth; Cataplexy; Chest pain; Cough; Diabetes mellitus; Dyspareunia; Dysphagia; Dyspnea; Eczema; Elevated C-reactive protein level; Elevated erythrocyte sedimentation rate; Erythema; Erythema nodosum; Excessive daytime sleepiness; Excessive daytime somnolence; Fatigue; Fever; Flexion contracture; Gastroesophageal reflux; Hallucinations; Hypopigmented skin patches; Increase in T cell count; Insomnia; Joint swelling; Juvenile rheumatoid arthritis; Leukopenia; Lymphadenopathy; Lymphoma; Macule; Malabsorption; Mediastinal lymphadenopathy; Mucosal telangiectasiae; Muscle weakness; Narrow foramen obturatorium; Nausea and vomiting; Night sweats; Oliguria; Osteolysis; Psoriasiform dermatitis; Pulmonary fibrosis; Pulmonary infiltrates; Recurrent infections; Skin rash; Skin ulcer; Splenomegaly; Telangiectasia of the skin; Thrombocytopenia; Transient global amnesia; Urticaria; Uveitis; Weight loss; Xerostomia
IGH14q32.33gene with protein productXomeDxSlice is not appropriate146910, 147010,IGHDY1, IGH@Abnormality of bone marrow cell morphology; Anemia; Anorexia; B-cell lymphoma; Constipation; Fatigue; Fever; Hyperhidrosis; Lymphadenopathy; Lymphoma; Mediastinal lymphadenopathy; Nausea and vomiting; Night sweats; Pulmonary infiltrates; Splenomegaly; Weight loss
IRF57q32.1100%gene with protein product607218Abnormality of lipid metabolism; Abnormality of the intrahepatic bile duct; Abnormality of the thyroid gland; Antinuclear antibody positivity; Arthralgia; Arthritis; Autoimmunity; Biliary cirrhosis; Carious teeth; Cirrhosis; Conjugated hyperbilirubinemia; Dermatographic urticaria; Dyspareunia; Dysphagia; Dyspnea; Elevated alkaline phosphatase; Flexion contracture; Gastroesophageal reflux; Hepatic failure; Hepatic fibrosis; Hepatocellular carcinoma; Hyperpigmentation of the skin; Hypopigmented skin patches; Increased IgM level; Jaundice; Malabsorption; Mucosal telangiectasiae; Muscle weakness; Narrow foramen obturatorium; Nausea and vomiting; Oliguria; Onychomycosis; Orthostatic hypotension; Osteolysis; Portal hypertension; Pruritus; Pulmonary fibrosis; Pulmonary infiltrates; Skin ulcer; Telangiectasia of the skin; Xerostomia
MALT118q21.3299.39%gene with protein product604860MLTAnemia; Autosomal recessive inheritance; B-cell lymphoma; Constipation; Fatigue; Fever; Growth delay; Hyperhidrosis; Immunodeficiency; Nausea and vomiting; Pulmonary infiltrates; Recurrent bacterial infections; Recurrent viral infections; Weight loss
PDGFRA4q1299.88%gene with protein product173490Abnormality of the nervous system; Autosomal dominant inheritance; Constipation; Dysphagia; Endocardial fibrosis; Eosinophilia; Fatigue; Gastrointestinal hemorrhage; Gastrointestinal stroma tumor; Hepatomegaly; Hyperpigmentation of the skin; Intestinal obstruction; Large hands; Myalgia; Myeloproliferative disorder; Nausea and vomiting; Neoplasm of the stomach; Neurofibromas; Pruritus; Pulmonary infiltrates; Restrictive cardiomyopathy; Sarcoma; Somatic mutation; Splenomegaly; Sporadic; Urticaria; Venous thrombosis
PRTN319p13.3100%gene with protein product177020Abdominal pain; Abnormality of the hypothalamus-pituitary axis; Abnormality of the oral cavity; Arthralgia; Autoimmunity; Cerebral ischemia; Chest pain; Chronic obstructive pulmonary disease; Cough; Elevated C-reactive protein level; Elevated erythrocyte sedimentation rate; Epistaxis; Fatigue; Fever; Glomerulopathy; Granulomatosis; Hematuria; Hemoptysis; Inflammatory abnormality of the eye; Nausea and vomiting; Papule; Periorbital edema; Proteinuria; Pulmonary fibrosis; Pulmonary infiltrates; Recurrent intrapulmonary hemorrhage; Recurrent respiratory infections; Respiratory insufficiency; Sinusitis; Skin rash; Vasculitis; Weight loss
PTPN221p13.299.15%gene with protein product600716PTPN8Abdominal pain; Abnormal eyebrow morphology; Abnormality of the eyelashes; Abnormality of the hypothalamus-pituitary axis; Abnormality of the oral cavity; Alopecia; Anorexia; Antinuclear antibody positivity; Apraxia; Arthralgia; Arthritis; Autoimmunity; Cataract; Cerebral ischemia; Chest pain; Chewing difficulties; Chronic obstructive pulmonary disease; Cognitive impairment; Cough; Dental malocclusion; Depressivity; Elevated C-reactive protein level; Elevated erythrocyte sedimentation rate; Epistaxis; Fatigue; Fever; Glaucoma; Glomerulopathy; Granulomatosis; Headache; Hematuria; Hemoptysis; Hypopigmented skin patches; Inflammatory abnormality of the eye; Iridocyclitis; Joint dislocation; Joint stiffness; Joint swelling; Juvenile rheumatoid arthritis; Limitation of joint mobility; Nausea and vomiting; Ophthalmoparesis; Papule; Periorbital edema; Poliosis; Polyarticular arthritis; Premature graying of hair; Proteinuria; Pulmonary fibrosis; Pulmonary infiltrates; Recurrent intrapulmonary hemorrhage; Recurrent respiratory infections; Respiratory insufficiency; Retinal detachment; Sensorineural hearing impairment; Short stature; Sinusitis; Skin rash; Sparse scalp hair; Vasculitis; Visual impairment; Vitiligo; Weight loss
TSC19q34100%gene with protein product605284TSCAbdominal pain; Abnormality of female internal genitalia; Abnormality of the respiratory system; Achromatic retinal patches; Adenoma sebaceum; Adult onset; Angiofibromas; Astrocytoma; Astrocytosis; Atelectasis; Attention deficit hyperactivity disorder; Autism; Autosomal dominant inheritance; Behavioral abnormality; Cafe-au-lait spot; Cardiac rhabdomyoma; Cerebral calcification; Chest pain; Chordoma; Chylothorax; Cognitive impairment; Confetti-like hypopigmented macules; Cortical dysplasia; Cortical tubers; Cough; Dental enamel pits; Dyspnea; EEG abnormality; Emphysema; Ependymoma; Focal seizures with impairment of consciousness or awareness; Focal white matter lesions; Gingival fibromatosis; Global developmental delay; Hematuria; Hemiparesis; Heterogeneous; Hypomelanotic macule; Hypopigmented skin patches; Hypothyroidism; Infantile onset; Infantile spasms; Intellectual disability; Lymphadenopathy; Multiple cafe-au-lait spots; Nevus flammeus; Optic atrophy; Optic nerve glioma; Papule; Phenotypic variability; Pneumothorax; Precocious puberty; Premature chromatid separation; Projection of scalp hair onto lateral cheek; Prominent occiput; Pulmonary infiltrates; Pulmonary lymphangiomyomatosis; Renal angiomyolipoma; Renal cell carcinoma; Renal cyst; Restrictive ventilatory defect; Retinal hamartoma; Seizures; Shagreen patch; Skin tags; Somatic mutation; Specific learning disability; Sporadic; Subcutaneous nodule; Subependymal giant-cell astrocytoma; Subependymal nodules; Subungual fibromas; Ungual fibroma; Wolff-Parkinson-White syndrome
TSC216p13.3100%gene with protein product191092TSC4Abdominal pain; Abnormality of female internal genitalia; Achromatic retinal patches; Adenoma sebaceum; Adult onset; Angiofibromas; Astrocytoma; Astrocytosis; Atelectasis; Attention deficit hyperactivity disorder; Autism; Autosomal dominant inheritance; Behavioral abnormality; Cafe-au-lait spot; Cardiac rhabdomyoma; Cerebral calcification; Chest pain; Chordoma; Chylothorax; Cognitive impairment; Confetti-like hypopigmented macules; Cortical dysplasia; Cortical tubers; Cough; Dyspnea; EEG abnormality; Emphysema; Ependymoma; Focal seizures with impairment of consciousness or awareness; Focal white matter lesions; Gingival fibromatosis; Global developmental delay; Hematuria; Hemiparesis; Heterogeneous; Hypopigmented skin patches; Hypothyroidism; Infantile onset; Infantile spasms; Intellectual disability; Lymphadenopathy; Multiple cafe-au-lait spots; Nevus flammeus; Optic atrophy; Optic nerve glioma; Papule; Phenotypic variability; Pneumothorax; Precocious puberty; Prominent occiput; Pulmonary infiltrates; Pulmonary lymphangiomyomatosis; Renal angiomyolipoma; Renal cell carcinoma; Renal cyst; Restrictive ventilatory defect; Retinal hamartoma; Seizures; Shagreen patch; Skin tags; Somatic mutation; Specific learning disability; Sporadic; Subcutaneous nodule; Subependymal giant-cell astrocytoma; Subependymal nodules; Subungual fibromas; Ungual fibroma; Wolff-Parkinson-White syndrome


The gene coverage data provided by GeneDx represent an estimate based on previous results, but the specific sequencing coverage data for the genes selected may vary from individual to individual, and cannot be predicted exactly. Changes to an approved gene list can only be made by contacting GeneDx directly at 888-729-1206 and asking to speak with a member of our Whole Exome Sequencing Laboratory.


  SUGGESTED CUSTOM SLICES  

Customize below OR enter Suggested Slice ID on printed requisition form
(e.g. 706 XomeDxSlice - Slice ID: CS-Albinism).

Suggested Slice IDSuggested Gene List Name
CS-AlbinismAlbinism
CS-AAAplastic Anemia
CS-AutoImmuneAutoimmune Disorders
CS-BBSBardet-Biedl Syndrome
CS-BMFBone Marrow Failure Syndromes
CS-CVIDCommon Variable Immune Deficiency
CS-CKUTCongenital Kidney and Urinary Tract (CKUT) Anomalies
CS-DSDDisorders of Sex Development
CS-EDEctodermal Dysplasia
CS-FAFanconi Anemia
CS-AnemiaHemolytic Anemia
CS-HeterotaxyHeterotaxy
CS-IBDInflammatory Bowel Disease
CS-MaleInfMale Infertility
CS-WWSMuscular dystropy-dystroglycanopathy (Walker-Warburg)
CS-NephroticNephrotic Syndrome
CS-ObesityObesity
CS-PPKCIPalmoplantar keratoderma plus congenital ichthyosis
CS-Primary ImmunodefPrimary Immunodeficiency
CS-RhabdoRhabdomyolysis
CS-SRTDShort-Rib Thoracic Dysplasia
CS-VACTERLVACTERL Association
CS-WSWaardenburg Syndrome