XomeDxSlice Tool

Now Available - NEW XomeDxSlice Xpanded – Custom slice testing with trio analysis for lists >150 genes.

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SELECTED GENES FOR YOUR SLICE

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Phenotypes
Osteomyelitis

Select all: Gene symbolChrAvg % covered at 10xLocus TypeNoteOMIMPrevious symbol(s)Phenotype(s)Slice(s)
ATL311q13.199.69%gene with protein product609369Autosomal dominant inheritance; Hallux valgus; Hyperkeratosis; Hyporeflexia of lower limbs; Osteolytic defects of the phalanges of the hand; Osteomyelitis; Sensory axonal neuropathy
BLNK10q24.1100%gene with protein product604515Agammaglobulinemia; Arthritis; Autosomal recessive inheritance; Chronic otitis media; Chronic sinusitis; Conjunctivitis; Cough; Diarrhea; Failure to thrive; Fatigue; Fever; Immunodeficiency; Infantile onset; Neutropenia; Osteomyelitis; Recurrent bacterial infections; Recurrent otitis media; Recurrent pneumonia; Recurrent respiratory infections; Recurrent skin infections; Sinusitis; Skin rashAutoimmune Disorders
CD79A19q13.299.5%gene with protein product112205IGAAgammaglobulinemia; Arthritis; Autosomal recessive inheritance; Chronic otitis media; Conjunctivitis; Cough; Diarrhea; Failure to thrive; Fatigue; Fever; Immunodeficiency; Osteomyelitis; Recurrent bacterial infections; Recurrent bronchitis; Recurrent otitis media; Recurrent respiratory infections; Recurrent skin infections; Sinusitis; Skin rashAutoimmune Disorders
CD79B17q23.3100%gene with protein product147245IGBAgammaglobulinemia; Arthritis; Autosomal recessive inheritance; Chronic otitis media; Chronic sinusitis; Conjunctivitis; Cough; Diarrhea; Failure to thrive; Fatigue; Fever; Immunodeficiency; Infantile onset; Osteomyelitis; Recurrent bacterial infections; Recurrent bronchitis; Recurrent otitis media; Recurrent pneumonia; Recurrent respiratory infections; Recurrent skin infections; Sinusitis; Skin rashAutoimmune Disorders ; Common Variable Immune Deficiency
CYBA16q24.299.98%gene with protein product608508Abnormality of neutrophils; Absence of bactericidal oxidative respiratory burst in phagocytes; Autosomal recessive inheritance; Cellulitis; Chronic obstructive pulmonary disease; Cutaneous photosensitivity; Decreased activity of NADPH oxidase; Deficiency or absence of cytochrome b(-245); Discoid lupus rash; Eczematoid dermatitis; Fever; Granulomatosis; Hepatomegaly; Hypermelanotic macule; Juvenile onset; Liver abscess; Lymphadenitis; Lymphadenopathy; Malabsorption; Mediastinal lymphadenopathy; Negative nitroblue tetrazolium reduction test; Osteomyelitis; Otitis media; Pyloric stenosis; Rectal abscess; Recurrent Aspergillus infections; Recurrent bacterial skin infections; Recurrent Burkholderia cepacia infections; Recurrent E. coli infections; Recurrent Klebsiella infections; Recurrent pneumonia; Recurrent respiratory infections; Recurrent Serratia marcescens infections; Recurrent Staphylococcus aureus infections; Sinusitis; Splenomegaly; Tracheoesophageal fistulaAutoimmune Disorders ; Inflammatory Bowel Disease ; Primary Immunodeficiency
CYBBXp21.1-p11.499.99%gene with protein product300481CGDAbnormality of neutrophils; Absence of bactericidal oxidative respiratory burst in phagocytes; Cellulitis; Chronic obstructive pulmonary disease; Cutaneous photosensitivity; Decreased activity of NADPH oxidase; Deficiency or absence of cytochrome b(-245); Discoid lupus rash; Eczematoid dermatitis; Fever; Granulomatosis; Hepatomegaly; Hypermelanotic macule; Juvenile onset; Liver abscess; Lymphadenitis; Lymphadenopathy; Malabsorption; Mediastinal lymphadenopathy; Negative nitroblue tetrazolium reduction test; Osteomyelitis; Otitis media; Pyloric stenosis; Rectal abscess; Recurrent Aspergillus infections; Recurrent bacterial skin infections; Recurrent Burkholderia cepacia infections; Recurrent E. coli infections; Recurrent Klebsiella infections; Recurrent mycobacterial infections; Recurrent pneumonia; Recurrent respiratory infections; Recurrent Serratia marcescens infections; Recurrent Staphylococcus aureus infections; Severe recurrent varicella; Sinusitis; Splenomegaly; Tracheoesophageal fistula; X-linked recessive inheritanceAutoimmune Disorders ; Inflammatory Bowel Disease ; Primary Immunodeficiency
DNMT119p13.299.61%gene with protein product126375DNMTAdult onset; Apathy; Ataxia; Autosomal dominant inheritance; Cataplexy; Cerebellar atrophy; Cerebral atrophy; Decreased number of peripheral myelinated nerve fibers; Dementia; Depressivity; Excessive daytime sleepiness; Excessive daytime somnolence; Hyperreflexia; Hyporeflexia; Impulsivity; Irritability; Memory impairment; Narcolepsy; Osteomyelitis; Primitive reflex; Progressive; Sensorineural hearing impairment; Sensory neuropathy; Spasticity
HBB11p15.499.99%gene with protein product141900Abdominal pain; Abnormal bone structure; Abnormal hemoglobin; Abnormality of metabolism/homeostasis; Abnormality of the dentition; Abnormality of the skeletal system; Abnormality of the spleen; Anemia; Anxiety; Aseptic necrosis; Autosomal dominant inheritance; Autosomal recessive inheritance; Cardiomegaly; Chest pain; Cholelithiasis; Chronic hemolytic anemia; Delayed puberty; Depressed nasal bridge; Depressivity; Dyspnea; Feeding difficulties; Fever; Genu valgum; Heinz body anemia; Hematuria; Hemolytic anemia; Hepatomegaly; Hypersplenism; Hypochromic microcytic anemia; Hypoxemia; Immunodeficiency; Increased red cell sickling tendency; Increased serum ferritin; Iron deficiency anemia; Jaundice; Leukocytosis; Malabsorption; Malar prominence; Microcytic anemia; Muscle weakness; Nonspherocytic hemolytic anemia; Osteomyelitis; Osteoporosis; Pallor; Paresthesia; Persistence of hemoglobin F; Pigment gallstones; Priapism; Recurrent bacterial infections; Recurrent infections; Reduced alpha/beta synthesis ratio; Reduced beta/alpha synthesis ratio; Renal insufficiency; Reticulocytosis; Retinopathy; Splenomegaly; Stroke; Thrombocytosis; Upslanted palpebral fissureHemolytic Anemia
HPGD4q34.199.69%gene with protein product601688Abnormal cortical bone morphology; Abnormal hair quantity; Abnormality of epiphysis morphology; Abnormality of the fingernails; Abnormality of the knee; Abnormality of tibia morphology; Acne; Arthralgia; Arthritis; Arthropathy; Autosomal dominant inheritance; Autosomal recessive inheritance; Bone pain; Clubbing; Clubbing of toes; Coarse facial features; Congenital onset; Cutis gyrata of scalp; Disproportionate tall stature; Eczematoid dermatitis; Erythema; High palate; Hyperhidrosis; Joint stiffness; Joint swelling; Large fontanelles; Limitation of joint mobility; Long clavicles; Mottled pigmentation; Osteoarthritis; Osteolysis; Osteolytic defects of the phalanges of the hand; Osteomyelitis; Osteopenia; Osteoporosis; Palmoplantar hyperkeratosis; Patent ductus arteriosus; Pectus excavatum; Ptosis; Redundant skin; Seborrheic dermatitis; Thickened calvaria; Wormian bones
IFNGR16q23.378.67%gene with protein product107470IFNGRAbnormality of abdomen morphology; Abnormality of blood and blood-forming tissues; Autosomal dominant inheritance; Autosomal recessive inheritance; Generalized lymphadenopathy; Immunodeficiency; Osteomyelitis; Recurrent mycobacterial infections; Salmonella osteomyelitisPrimary Immunodeficiency
IGHM14q32.33immunoglobulin geneXomeDxSlice is not appropriate.147020Agammaglobulinemia; Arthritis; Autosomal recessive inheritance; B lymphocytopenia; Bronchiectasis; Chronic otitis media; Conjunctivitis; Cough; Diarrhea; Failure to thrive; Fatigue; Fever; Immunodeficiency; Infantile onset; Neutropenia; Osteomyelitis; Recurrent bacterial infections; Recurrent enteroviral infections; Recurrent otitis media; Recurrent pneumonia; Recurrent respiratory infections; Recurrent sinusitis; Recurrent skin infections; Sinusitis; Skin rash
IGLL122q11.23100%gene with protein product146770IGLLAgammaglobulinemia; Arthritis; Autosomal recessive inheritance; Chronic otitis media; Conjunctivitis; Cough; Diarrhea; Failure to thrive; Fatigue; Fever; Immunodeficiency; Infantile onset; Meningitis; Osteomyelitis; Recurrent bacterial infections; Recurrent pneumonia; Recurrent respiratory infections; Recurrent skin infections; Sinusitis; Skin rashAutoimmune Disorders
IL1RN2q14.1100%gene with protein product147679Arthralgia; Autosomal recessive inheritance; Epidermal acanthosis; Fetal distress; Hepatomegaly; Hyperkeratosis; Joint swelling; Osteomyelitis; Periostitis; Splenomegaly; Stomatitis
LPIN218p11.3199.99%gene with protein product605519Abnormality of bone marrow cell morphology; Acne; Arthralgia; Autosomal recessive inheritance; Bone pain; Cachexia; Chronic recurrent multifocal osteomyelitis; Congenital hypoplastic anemia; Edema; Failure to thrive; Fever; Flexion contracture; Growth delay; Headache; Hepatomegaly; Hypochromic microcytic anemia; Increased bone mineral density; Inflammatory abnormality of the skin; Leukocytosis; Metaphyseal irregularity; Myalgia; Osteomyelitis; Papule; Pustule; Splenomegaly; Synovitis
LRRC8A9q34.11100%gene with protein product608360LRRC8Agammaglobulinemia; Arthritis; Autosomal dominant inheritance; Chronic otitis media; Conjunctivitis; Cough; Diarrhea; Epicanthus; Failure to thrive; Fatigue; Fever; High palate; Hypertelorism; Immunodeficiency; Low-set ears; Osteomyelitis; Recurrent respiratory infections; Recurrent skin infections; Sinusitis; Skin rashAutoimmune Disorders
NCF17q11.2359.72%gene with protein productPlease note that the common pathogenic variant c.75_76delGT is not detectable by XomeDxSlice. NCF1 analysis is available through the Chronic Granulomatous Disease Panel on the Rare Disorders menu: https://www.genedx.com/test-catalog/available-tests/chronic-granulomatous-disease-panel/608512Abnormality of neutrophils; Absence of bactericidal oxidative respiratory burst in phagocytes; Autosomal recessive inheritance; Cellulitis; Chronic obstructive pulmonary disease; Cutaneous photosensitivity; Decreased activity of NADPH oxidase; Discoid lupus rash; Eczematoid dermatitis; Fever; Granulomatosis; Hepatomegaly; Hypermelanotic macule; Juvenile onset; Liver abscess; Lymphadenitis; Lymphadenopathy; Malabsorption; Mediastinal lymphadenopathy; Negative nitroblue tetrazolium reduction test; Osteomyelitis; Otitis media; Pyloric stenosis; Rectal abscess; Recurrent Aspergillus infections; Recurrent bacterial skin infections; Recurrent Burkholderia cepacia infections; Recurrent E. coli infections; Recurrent Klebsiella infections; Recurrent pneumonia; Recurrent respiratory infections; Recurrent Serratia marcescens infections; Recurrent Staphylococcus aureus infections; Sinusitis; Splenomegaly; Tracheoesophageal fistulaInflammatory Bowel Disease ; Primary Immunodeficiency
NCF21q25.399.98%gene with protein product608515Abnormality of neutrophils; Absence of bactericidal oxidative respiratory burst in phagocytes; Autosomal recessive inheritance; Cellulitis; Chronic obstructive pulmonary disease; Cutaneous photosensitivity; Decreased activity of NADPH oxidase; Discoid lupus rash; Eczematoid dermatitis; Fever; Granulomatosis; Hepatomegaly; Hypermelanotic macule; Juvenile onset; Liver abscess; Lymphadenitis; Lymphadenopathy; Malabsorption; Mediastinal lymphadenopathy; Negative nitroblue tetrazolium reduction test; Osteomyelitis; Otitis media; Pyloric stenosis; Rectal abscess; Recurrent Aspergillus infections; Recurrent bacterial skin infections; Recurrent Burkholderia cepacia infections; Recurrent E. coli infections; Recurrent Klebsiella infections; Recurrent pneumonia; Recurrent respiratory infections; Recurrent Serratia marcescens infections; Recurrent Staphylococcus aureus infections; Sinusitis; Splenomegaly; Tracheoesophageal fistulaAutoimmune Disorders ; Inflammatory Bowel Disease ; Primary Immunodeficiency
NTRK11q23.1100%gene with protein product191315Acral ulceration and osteomyelitis leading to autoamputation of digits; Anhidrosis; Autosomal dominant inheritance; Autosomal recessive inheritance; Corneal scarring; Corneal ulceration; Decreased number of small peripheral myelinated nerve fibers; Dysautonomia; Emotional lability; Episodic fever; Global developmental delay; Hyperactivity; Hypotrichosis of the scalp; Impaired pain sensation; Infantile onset; Intellectual disability; Irritability; Keratitis; Medullary thyroid carcinoma; Nail dysplasia; Nail dystrophy; Neuropathic arthropathy; Opacification of the corneal stroma; Osteomyelitis; Pain insensitivity; Postural hypotension with compensatory tachycardia; Recurrent corneal erosions; Self-injurious behavior; Self-mutilation; Skin ulcerPalmoplantar keratoderma plus congenital ichthyosis
NTRK11q23.1100%gene with protein product191315Acral ulceration and osteomyelitis leading to autoamputation of digits; Anhidrosis; Autosomal dominant inheritance; Autosomal recessive inheritance; Corneal scarring; Corneal ulceration; Decreased number of small peripheral myelinated nerve fibers; Dysautonomia; Emotional lability; Episodic fever; Global developmental delay; Hyperactivity; Hypotrichosis of the scalp; Impaired pain sensation; Infantile onset; Intellectual disability; Irritability; Keratitis; Medullary thyroid carcinoma; Nail dysplasia; Nail dystrophy; Neuropathic arthropathy; Opacification of the corneal stroma; Osteomyelitis; Pain insensitivity; Postural hypotension with compensatory tachycardia; Recurrent corneal erosions; Self-injurious behavior; Self-mutilation; Skin ulcerPalmoplantar keratoderma plus congenital ichthyosis
PIK3R15q13.199.16%gene with protein product171833Abnormal pupil morphology; Abnormality of dental enamel; Abnormality of the immune system; Agammaglobulinemia; Alopecia; Arthritis; Autosomal dominant inheritance; Autosomal recessive inheritance; Birth length less than 3rd percentile; Cataract; Chronic otitis media; Clinodactyly; Conjunctivitis; Cough; Decreased antibody level in blood; Deeply set eye; Delayed eruption of teeth; Delayed skeletal maturation; Delayed speech and language development; Dental malocclusion; Diabetes mellitus; Diarrhea; Dimple chin; Downturned corners of mouth; Enlarged epiphyses; Excessive wrinkled skin; Failure to thrive; Fatigue; Fever; Frontal bossing; Glaucoma; Glucose intolerance; Hyperglycemia; Hypodontia; Hypoplasia of the iris; Hypotrichosis; Immunodeficiency; Infantile onset; Inguinal hernia; Insulin resistance; Insulin-resistant diabetes mellitus; Intrauterine growth retardation; Joint hyperflexibility; Joint laxity; Lipoatrophy; Lipodystrophy; Macrotia; Megalocornea; Microdontia; Micrognathia; Midface retrusion; Myopia; Neurological speech impairment; Neutropenia; Osteomyelitis; Poor appetite; Premature skin wrinkling; Prominent forehead; Radial deviation of finger; Recurrent bacterial infections; Recurrent respiratory infections; Recurrent skin infections; Rieger anomaly; Sensorineural hearing impairment; Severe short stature; Sinusitis; Skin rash; Small for gestational age; Telecanthus; Thin skin; Triangular face; Underdeveloped nasal alae; Weight loss; Wide nasal bridgeAutoimmune Disorders ; Common Variable Immune Deficiency ; Inflammatory Bowel Disease
RETREG15p15.1100%gene with protein productformer name = FAM134B613114FAM134BAbnormal cortical bone morphology; Abnormality of epiphysis morphology; Abnormality of metabolism/homeostasis; Abnormality of the ankles; Abnormality of the eye; Abnormality of the hip bone; Abnormality of the knee; Acral ulceration leading to autoamputation of digits; Anhidrosis; Areflexia; Autosomal recessive inheritance; Decreased nerve conduction velocity; Decreased number of peripheral myelinated nerve fibers; Decreased sensory nerve conduction velocity; Decreased taste sensation; Dystrophic fingernails; Dystrophic toenail; Episodic hyperhidrosis; Feeding difficulties in infancy; Foot acroosteolysis; Gastroesophageal reflux; Generalized hypotonia; Hyperhidrosis; Hyperlordosis; Hyporeflexia; Infantile onset; Juvenile onset; Osteolytic defects of the phalanges of the hand; Osteomyelitis; Painless fractures due to injury; Paronychia; Peripheral axonal neuropathy; Peripheral neuropathy; Progressive; Reduced bone mineral density; Skeletal muscle atrophy; Slow progression; Spasticity; Tapered finger; Urinary incontinence; Wormian bones
SLCO2A13q22.1-q22.2100%gene with protein product601460SLC21A2, MATR1Abnormal cortical bone morphology; Abnormal hair quantity; Abnormality of epiphysis morphology; Abnormality of the fingernails; Acne; Arthralgia; Arthritis; Autosomal recessive inheritance; Bone pain; Clubbing; Clubbing of toes; Coarse facial features; Cutis gyrata of scalp; Hyperhidrosis; Joint swelling; Limitation of joint mobility; Osteolysis; Osteomyelitis; Periostosis; Ptosis; Seborrheic dermatitis
SPTLC214q24.3100%gene with protein product605713Abnormality of the foot; Anhidrosis; Autoamputation; Autosomal dominant inheritance; Distal muscle weakness; Distal sensory impairment; Distal sensory loss of all modalities; Dysesthesia; Osteomyelitis; Sensorimotor neuropathy; Skin ulcer
TCF319p13.3100%gene with protein product147141Agammaglobulinemia; Arthritis; Autosomal dominant inheritance; B lymphocytopenia; Chronic otitis media; Conjunctivitis; Cough; Diarrhea; Failure to thrive; Fatigue; Fever; Immunodeficiency; Infantile onset; Osteomyelitis; Recurrent respiratory infections; Recurrent skin infections; Sinusitis; Skin rash
TCIRG111q13.2100%gene with protein product604592Abnormal blistering of the skin; Abnormality of epiphysis morphology; Abnormality of hair texture; Abnormality of temperature regulation; Abnormality of the metaphysis; Abnormality of the ribs; Abnormality of visual evoked potentials; Anemia; Autosomal recessive inheritance; Blindness; Bone pain; Bowing of the long bones; Carious teeth; Chronic rhinitis; Coxa vara; Craniosynostosis; Delayed eruption of teeth; Elevated alkaline phosphatase; Facial palsy; Facial paralysis; Failure to thrive; Flared metaphysis; Frontal bossing; Growth delay; Hearing impairment; Hepatomegaly; Heterogeneous; Hydrocephalus; Lymphadenopathy; Macrocephaly; Narrow chest; Nystagmus; Ophthalmoparesis; Opsoclonus; Optic atrophy; Optic nerve compression; Osteomyelitis; Osteopetrosis; Otitis media; Pallor; Pancytopenia; Pathologic fracture; Premature loss of primary teeth; Recurrent fractures; Recurrent respiratory infections; Reduced bone mineral density; Sandwich appearance of vertebral bodies; Seizures; Splenomegaly; Tetany; Tremor; Visual impairmentAplastic Anemia ; Bone Marrow Failure Syndromes


The gene coverage data provided by GeneDx represent an estimate based on previous results, but the specific sequencing coverage data for the genes selected may vary from individual to individual, and cannot be predicted exactly. Changes to an approved gene list can only be made by contacting GeneDx directly at 888-729-1206 and asking to speak with a member of our Whole Exome Sequencing Laboratory.


  SUGGESTED CUSTOM SLICES  

Customize below OR enter Suggested Slice ID on printed requisition form
(e.g. 706 XomeDxSlice - Slice ID: CS-Albinism).

Suggested Slice IDSuggested Gene List Name
CS-AlbinismAlbinism
CS-AAAplastic Anemia
CS-AutoImmuneAutoimmune Disorders
CS-BBSBardet-Biedl Syndrome
CS-BMFBone Marrow Failure Syndromes
CS-CVIDCommon Variable Immune Deficiency
CS-CKUTCongenital Kidney and Urinary Tract (CKUT) Anomalies
CS-DSDDisorders of Sex Development
CS-EDEctodermal Dysplasia
CS-FAFanconi Anemia
CS-AnemiaHemolytic Anemia
CS-HeterotaxyHeterotaxy
CS-IBDInflammatory Bowel Disease
CS-MaleInfMale Infertility
CS-WWSMuscular dystropy-dystroglycanopathy (Walker-Warburg)
CS-NephroticNephrotic Syndrome
CS-ObesityObesity
CS-PPKCIPalmoplantar keratoderma plus congenital ichthyosis
CS-Primary ImmunodefPrimary Immunodeficiency
CS-RhabdoRhabdomyolysis
CS-SRTDShort-Rib Thoracic Dysplasia
CS-VACTERLVACTERL Association
CS-WSWaardenburg Syndrome