XomeDxSlice Tool

Now Available - NEW XomeDxSlice Xpanded – Custom slice testing with trio analysis for lists >150 genes.

INSTRUCTIONS (AND TIPS)

ENTER GENES BELOW AND CLICK "ADD GENES TO SLICE"

If cutting and pasting from another document, please be sure to list EITHER one gene symbol per line OR enter a comma-separated list.


OR

SEARCH BY GENE SYMBOL OR PHENOTYPE (HPO TERM)

You may also use this search to review average exome sequencing coverage by entering the gene symbol below.

SELECTED GENES FOR YOUR SLICE

What do you want to do?

Place an e-order of this Slice on a specific patient through the GeneDx Portal  
Obtain a Slice ID to order testing with a printed requisition form  
Only email the gene list to myself and/or others at this time  


 
Phenotypes
Optic nerve compression

Select all: Gene symbolChrAvg % covered at 10xLocus TypeNoteOMIMPrevious symbol(s)Phenotype(s)Slice(s)
CA28q21.2100%gene with protein product611492Abnormality of dental morphology; Abnormality of epiphysis morphology; Abnormality of the renal tubule; Anemia; Aseptic necrosis; Autosomal recessive inheritance; Basal ganglia calcification; Bone pain; Carious teeth; Cerebral calcification; Cranial hyperostosis; Dental malocclusion; Diaphyseal sclerosis; Distal renal tubular acidosis; Elevated serum acid phosphatase; Extramedullary hematopoiesis; Failure to thrive; Genu valgum; Global developmental delay; Hepatomegaly; Hepatosplenomegaly; Intellectual disability; Mandibular prognathia; Optic nerve compression; Osteopetrosis; Periodic hypokalemic paresis; Peripheral neuropathy; Recurrent fractures; Reduced bone mineral density; Short stature; Splenomegaly; Thrombocytopenia; Visual lossAlbinism ; Aplastic Anemia ; Bone Marrow Failure Syndromes ; Fanconi Anemia
CLCN716p13.3100%gene with protein product602727Abnormal blistering of the skin; Abnormality of epiphysis morphology; Abnormality of hair texture; Abnormality of pelvic girdle bone morphology; Abnormality of temperature regulation; Abnormality of the metacarpal bones; Abnormality of the metaphysis; Abnormality of the ribs; Abnormality of the vertebral endplates; Abnormality of visual evoked potentials; Anemia; Arthritis; Aseptic necrosis; Autosomal dominant inheritance; Autosomal recessive inheritance; Bone pain; Bowing of the long bones; Chronic rhinitis; Craniosynostosis; Delayed eruption of teeth; Elevated serum acid phosphatase; Facial palsy; Facial paralysis; Fractures of the long bones; Frontal bossing; Generalized osteosclerosis; Genu valgum; Growth delay; Hearing impairment; Hepatomegaly; Hepatosplenomegaly; Heterogeneous; Hip osteoarthritis; Hydrocephalus; Joint dislocation; Juvenile onset; Lymphadenopathy; Macrocephaly; Mandibular osteomyelitis; Narrow chest; Nystagmus; Opsoclonus; Optic atrophy; Optic nerve compression; Osteoarthritis; Osteopetrosis; Otitis media; Pallor; Premature loss of primary teeth; Recurrent fractures; Recurrent respiratory infections; Reduced bone mineral density; Reticulocytosis; Short distal phalanx of finger; Short stature; Splenomegaly; Tremor; Visual impairment; Visual loss
SNX107p15.299.98%gene with protein product614780Abnormal blistering of the skin; Abnormality of epiphysis morphology; Abnormality of hair texture; Abnormality of temperature regulation; Abnormality of the metaphysis; Abnormality of the ribs; Abnormality of visual evoked potentials; Anemia; Autosomal recessive inheritance; Bone pain; Bowing of the long bones; Chronic rhinitis; Craniosynostosis; Delayed eruption of teeth; Facial palsy; Failure to thrive; Feeding difficulties; Frontal bossing; Growth delay; Hearing impairment; Hepatomegaly; Hydrocephalus; Lymphadenopathy; Macrocephaly; Narrow chest; Nystagmus; Opsoclonus; Optic atrophy; Optic nerve compression; Osteopetrosis; Otitis media; Pallor; Premature loss of primary teeth; Recurrent fractures; Recurrent respiratory infections; Reduced bone mineral density; Splenomegaly; Thrombocytopenia; Tremor; Visual impairment
TCIRG111q13.2100%gene with protein product604592Abnormal blistering of the skin; Abnormality of epiphysis morphology; Abnormality of hair texture; Abnormality of temperature regulation; Abnormality of the metaphysis; Abnormality of the ribs; Abnormality of visual evoked potentials; Anemia; Autosomal recessive inheritance; Blindness; Bone pain; Bowing of the long bones; Carious teeth; Chronic rhinitis; Coxa vara; Craniosynostosis; Delayed eruption of teeth; Elevated alkaline phosphatase; Facial palsy; Facial paralysis; Failure to thrive; Flared metaphysis; Frontal bossing; Growth delay; Hearing impairment; Hepatomegaly; Heterogeneous; Hydrocephalus; Lymphadenopathy; Macrocephaly; Narrow chest; Nystagmus; Ophthalmoparesis; Opsoclonus; Optic atrophy; Optic nerve compression; Osteomyelitis; Osteopetrosis; Otitis media; Pallor; Pancytopenia; Pathologic fracture; Premature loss of primary teeth; Recurrent fractures; Recurrent respiratory infections; Reduced bone mineral density; Sandwich appearance of vertebral bodies; Seizures; Splenomegaly; Tetany; Tremor; Visual impairmentAplastic Anemia ; Bone Marrow Failure Syndromes
TGFB119q13.1100%gene with protein product190180TGFB, DPD1Abnormality of the humerus; Abnormality of the ulna; Abnormality of tibia morphology; Aplasia/Hypoplasia of the radius; Autosomal dominant inheritance; Biliary cirrhosis; Bone marrow hypocellularity; Bone pain; Cachexia; Carious teeth; Cortical thickening of long bone diaphyses; Craniofacial osteosclerosis; Decreased antibody level in blood; Delayed puberty; Diaphyseal sclerosis; Diplopia; Easy fatigability; Elevated aldolase level; Exocrine pancreatic insufficiency; Genu valgum; Headache; Hearing impairment; Hyperostosis; Immunodeficiency; Juvenile onset; Limb pain; Limitation of joint mobility; Malabsorption; Mandibular prognathia; Metaphyseal dysplasia; Muscle weakness; Optic nerve compression; Poor appetite; Proptosis; Pulmonary fibrosis; Recurrent respiratory infections; Reduced subcutaneous adipose tissue; Sclerosis of skull base; Scoliosis; Skeletal muscle atrophy; Slender build; Waddling gait
TNFRSF11A18q21.33100%gene with protein product603499PDB2, LOH18CR1Abnormal trabecular bone morphology; Abnormality of retinal pigmentation; Abnormality of the clavicle; Abnormality of the dentition; Anemia; Autosomal dominant inheritance; Autosomal recessive inheritance; Bone pain; Bowing of the long bones; Conductive hearing impairment; Cranial hyperostosis; Elevated alkaline phosphatase; Fragile teeth; Global developmental delay; Hearing impairment; Hydroxyprolinuria; Hypertension; Hyperuricemia; Macrocephaly; Nystagmus; Optic atrophy; Optic nerve compression; Osteolysis; Osteopetrosis; Osteoporosis; Pathologic fracture; Pectus carinatum; Premature loss of teeth; Progressive; Progressive visual loss; Recurrent fractures; Recurrent pneumonia; Rough bone trabeculation; Short stature; Thin bony cortex
TNFSF1113q14100%gene with protein product602642Abnormal blistering of the skin; Abnormality of epiphysis morphology; Abnormality of hair texture; Abnormality of temperature regulation; Abnormality of the metaphysis; Abnormality of the ribs; Abnormality of visual evoked potentials; Anemia; Autosomal recessive inheritance; Blindness; Bone pain; Bowing of the long bones; Carious teeth; Chronic rhinitis; Chronic rhinitis due to narrow nasal airway; Cranial hyperostosis; Craniosynostosis; Delayed eruption of teeth; Diaphyseal sclerosis; Extramedullary hematopoiesis; Facial paralysis; Genu valgum; Growth delay; Hearing impairment; Hepatomegaly; Hepatosplenomegaly; Hydrocephalus; Lymphadenopathy; Macrocephaly; Mandibular osteomyelitis; Mandibular prognathia; Narrow chest; Nystagmus; Opsoclonus; Optic atrophy; Optic nerve compression; Osteopetrosis; Otitis media; Pallor; Pancytopenia; Persistence of primary teeth; Premature loss of primary teeth; Recurrent fractures; Recurrent respiratory infections; Reduced bone mineral density; Splenomegaly; Thrombocytopenia; Tremor; Visual impairment


The gene coverage data provided by GeneDx represent an estimate based on previous results, but the specific sequencing coverage data for the genes selected may vary from individual to individual, and cannot be predicted exactly. Changes to an approved gene list can only be made by contacting GeneDx directly at 888-729-1206 and asking to speak with a member of our Whole Exome Sequencing Laboratory.


  SUGGESTED CUSTOM SLICES  

Customize below OR enter Suggested Slice ID on printed requisition form
(e.g. 706 XomeDxSlice - Slice ID: CS-Albinism).

Suggested Slice IDSuggested Gene List Name
CS-AlbinismAlbinism
CS-AAAplastic Anemia
CS-AutoImmuneAutoimmune Disorders
CS-BBSBardet-Biedl Syndrome
CS-BMFBone Marrow Failure Syndromes
CS-CVIDCommon Variable Immune Deficiency
CS-CKUTCongenital Kidney and Urinary Tract (CKUT) Anomalies
CS-DSDDisorders of Sex Development
CS-EDEctodermal Dysplasia
CS-FAFanconi Anemia
CS-AnemiaHemolytic Anemia
CS-HeterotaxyHeterotaxy
CS-IBDInflammatory Bowel Disease
CS-MaleInfMale Infertility
CS-WWSMuscular dystropy-dystroglycanopathy (Walker-Warburg)
CS-NephroticNephrotic Syndrome
CS-ObesityObesity
CS-PPKCIPalmoplantar keratoderma plus congenital ichthyosis
CS-Primary ImmunodefPrimary Immunodeficiency
CS-RhabdoRhabdomyolysis
CS-SRTDShort-Rib Thoracic Dysplasia
CS-VACTERLVACTERL Association
CS-WSWaardenburg Syndrome