XomeDxSlice Tool

Now Available - NEW XomeDxSlice Xpanded – Custom slice testing with trio analysis for lists >150 genes.

INSTRUCTIONS (AND TIPS)

ENTER GENES BELOW AND CLICK "ADD GENES TO SLICE"

If cutting and pasting from another document, please be sure to list EITHER one gene symbol per line OR enter a comma-separated list.


OR

SEARCH BY GENE SYMBOL OR PHENOTYPE (HPO TERM)

You may also use this search to review average exome sequencing coverage by entering the gene symbol below.

SELECTED GENES FOR YOUR SLICE

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Phenotypes
Missing ribs

Select all: Gene symbolChrAvg % covered at 10xLocus TypeNoteOMIMPrevious symbol(s)Phenotype(s)Slice(s)
BMPER7p14.3100%gene with protein product608699Abnormal liver lobulation; Abnormal vertebral segmentation and fusion; Absent in utero ossification of vertebral bodies; Absent in utero rib ossification; Absent or minimally ossified vertebral bodies; Autosomal recessive inheritance; Bell-shaped thorax; Cleft palate; Cystic renal dysplasia; Depressed nasal bridge; Depressed nasal ridge; Disproportionate short-trunk short stature; Enlarged kidney; Enlarged thorax; Epicanthus; Generalized hypotonia; Global developmental delay; Hammertoe; Hypertelorism; Hypoplastic fingernail; Increased nuchal translucency; Inguinal hernia; Intrauterine growth retardation; Large fontanelles; Low-set ears; Lumbosacral meningocele; Micrognathia; Missing ribs; Multiple renal cysts; Muscular hypotonia; Myelomeningocele; Narrow pelvis bone; Nephroblastomatosis; Nephrogenic rest; Oligohydramnios; Polymicrogyria; Protuberant abdomen; Pulmonary hypoplasia; Respiratory distress; Respiratory insufficiency; Short neck; Short nose; Short thorax; Talipes equinovarus; Thoracic hypoplasia; Tracheomalacia; Unossified sacrum; Vertebral segmentation defect; Webbed neck
BMPER7p14.3100%gene with protein product608699Abnormal liver lobulation; Abnormal vertebral segmentation and fusion; Absent in utero ossification of vertebral bodies; Absent in utero rib ossification; Absent or minimally ossified vertebral bodies; Autosomal recessive inheritance; Bell-shaped thorax; Cleft palate; Cystic renal dysplasia; Depressed nasal bridge; Depressed nasal ridge; Disproportionate short-trunk short stature; Enlarged kidney; Enlarged thorax; Epicanthus; Generalized hypotonia; Global developmental delay; Hammertoe; Hypertelorism; Hypoplastic fingernail; Increased nuchal translucency; Inguinal hernia; Intrauterine growth retardation; Large fontanelles; Low-set ears; Lumbosacral meningocele; Micrognathia; Missing ribs; Multiple renal cysts; Muscular hypotonia; Myelomeningocele; Narrow pelvis bone; Nephroblastomatosis; Nephrogenic rest; Oligohydramnios; Polymicrogyria; Protuberant abdomen; Pulmonary hypoplasia; Respiratory distress; Respiratory insufficiency; Short neck; Short nose; Short thorax; Talipes equinovarus; Thoracic hypoplasia; Tracheomalacia; Unossified sacrum; Vertebral segmentation defect; Webbed neck
FLI111q24.3100%gene with protein product193067Abnormal form of the vertebral bodies; Abnormality of the cardiovascular system; Anteverted nares; Aplasia/Hypoplasia of the earlobes; Aplasia/Hypoplasia of the eyebrow; Attention deficit hyperactivity disorder; Bone marrow hypocellularity; Broad columella; Broad hallux phalanx; Constipation; Cryptorchidism; Downslanted palpebral fissures; Epicanthus; Facial asymmetry; Feeding difficulties in infancy; Finger syndactyly; Frontal bossing; Global developmental delay; High forehead; Hypertelorism; Intellectual disability; Long hallux; Long philtrum; Low-set, posteriorly rotated ears; Macrocephaly; Microcornea; Missing ribs; Pes planus; Premature birth; Ptosis; Recurrent respiratory infections; Short neck; Short nose; Short stature; Short toe; Smooth philtrum; Strabismus; Thrombocytopenia; Toe clinodactyly; Toe syndactyly; Ventricular septal defect; Ventriculomegaly
HES717p13.1100%gene with protein product608059Abnormal form of the vertebral bodies; Abnormality of immune system physiology; Abnormality of the intervertebral disk; Abnormality of the odontoid process; Autosomal recessive inheritance; Block vertebrae; Hemivertebrae; Intrauterine growth retardation; Kyphosis; Missing ribs; Myelomeningocele; Respiratory insufficiency; Restrictive deficit on pulmonary function testing; Rib fusion; Rib segmentation abnormalities; Scoliosis; Short neck; Short stature; Short thorax; Situs inversus totalis; Spina bifida occulta; Unilateral vertebral artery hypoplasia; Vertebral segmentation defectHeterotaxy
PTPN1112q24.1399.75%gene with protein product176876NS1Abnormal bleeding; Abnormal dermatoglyphics; Abnormal hair quantity; Abnormal joint morphology; Abnormal platelet function; Abnormal pulmonary valve morphology; Abnormality of coagulation; Abnormality of epiphysis morphology; Abnormality of the metaphysis; Abnormality of the pulmonary artery; Abnormality of the spleen; Amegakaryocytic thrombocytopenia; Aplasia of the ovary; Aplasia/Hypoplasia of the abdominal wall musculature; Arrhythmia; Aseptic necrosis; Atrial septal defect; Atrioventricular canal defect; Autosomal dominant inheritance; Bone pain; Bowing of the long bones; Brachydactyly; Bundle branch block; Cafe-au-lait spot; Cleft palate; Clinodactyly; Coarctation of aorta; Coarse hair; Cranial nerve paralysis; Cryptorchidism; Cubitus valgus; Cystic hygroma; Decreased fertility; Delayed menarche; Delayed puberty; Delayed skeletal maturation; Dental malocclusion; Depressed nasal ridge; Downslanted palpebral fissures; Dysarthria; Enlarged thorax; Epicanthus; Exostoses; Failure to thrive in infancy; Feeding difficulties in infancy; Freckling; Hepatomegaly; Heterogeneous; High forehead; High palate; High, narrow palate; Hyperextensible skin; Hypertelorism; Hypertrophic cardiomyopathy; Hypogonadotrophic hypogonadism; Hypoplasia of the ovary; Hyposmia; Hypospadias; Intellectual disability, mild; Intrauterine growth retardation; Joint hyperflexibility; Juvenile myelomonocytic leukemia; Kyphoscoliosis; Limited elbow movement; Low posterior hairline; Low-set ears; Low-set, posteriorly rotated ears; Lymphedema; Male infertility; Mandibular prognathia; Melanocytic nevus; Micrognathia; Micropenis; Midface retrusion; Missing ribs; Mitral valve prolapse; Multiple digital exostoses; Multiple enchondromatosis; Multiple lentigines; Muscle weakness; Muscular hypotonia; Myopia; Neurofibrosarcoma; Parietal bossing; Patent ductus arteriosus; Pectus carinatum; Pectus excavatum; Pectus excavatum of inferior sternum; Posteriorly rotated ears; Postnatal growth retardation; Proptosis; Protruding ear; Ptosis; Pulmonary artery stenosis; Pulmonic stenosis; Radial deviation of finger; Reduced factor XII activity; Reduced factor XIII activity; Scapular winging; Scoliosis; Sensorineural hearing impairment; Severe sensorineural hearing impairment; Shield chest; Short neck; Short stature; Somatic mutation; Spina bifida occulta; Sprengel anomaly; Strabismus; Subvalvular aortic stenosis; Superior pectus carinatum; Synovitis; Thick lower lip vermilion; Thickened helices; Thickened nuchal skin fold; Third degree atrioventricular block; Triangular face; Unilateral renal agenesis; Ventricular septal defect; Webbed neck; Wide intermamillary distance; Wide nasal bridgeBone Marrow Failure Syndromes
ROR29q22.31100%gene with protein product602337NTRKR2, BDB, BDB12nd-5th toe middle phalangeal hypoplasia; Absent fingernail; Absent uvula; Ankyloglossia; Anonychia; Anteverted nares; Aplasia/Hypoplasia involving the metacarpal bones; Aplasia/Hypoplasia of the distal phalanges of the toes; Autosomal dominant inheritance; Autosomal recessive inheritance; Bifid distal phalanx of toe; Bifid tongue; Brachydactyly; Broad hallux phalanx; Broad thumb; Broad toe; Camptodactyly; Chronic otitis media; Clinodactyly; Clinodactyly of the 5th finger; Clitoral hypoplasia; Cryptorchidism; Delayed cranial suture closure; Delayed eruption of permanent teeth; Delayed skeletal maturation; Dental crowding; Depressed nasal bridge; Disproportionate short-limb short stature; Downslanted palpebral fissures; Downturned corners of mouth; Duplication of the distal phalanx of hand; Elbow dislocation; Epicanthus; Fingernail dysplasia; Flat face; Frontal bossing; Gingival overgrowth; Global developmental delay; Hearing impairment; Hemivertebrae; Hydronephrosis; Hypertelorism; Hypoplasia of penis; Hypoplastic female external genitalia; Hypoplastic fingernail; Hypoplastic labia majora; Hypoplastic sacrum; Inguinal hernia; Intellectual disability; Joint contracture of the hand; Kyphosis; Long eyelashes; Long palpebral fissure; Long philtrum; Low-set, posteriorly rotated ears; Macrocephaly; Macroglossia; Malar flattening; Mesomelia; Micrognathia; Micropenis; Midface retrusion; Missing ribs; Nevus flammeus; Open bite; Pectus excavatum; Posteriorly rotated ears; Proptosis; Radial deviation of finger; Renal duplication; Rib fusion; Right ventricular outlet obstruction; Scoliosis; Short distal phalanx of finger; Short foot; Short long bone; Short metacarpal; Short middle phalanx of finger; Short middle phalanx of the 5th finger; Short nose; Short palm; Syndactyly; Tented upper lip vermilion; Thin upper lip vermilion; Thoracic hemivertebrae; Thoracolumbar scoliosis; Triangular mouth; Type B brachydactyly; Umbilical hernia; Upslanted palpebral fissure; Ventricular septal defect; Vertebral fusion; Vertebral segmentation defect; Wide anterior fontanel; Wide mouth; Wide nasal bridgeDisorders of Sex Development
SIX614q23.1100%gene with protein product606326OPTX2Agenesis of corpus callosum; Anophthalmia; Anterior pituitary hypoplasia; Autosomal dominant inheritance; Autosomal recessive inheritance; Butterfly vertebrae; Cataract; Coloboma; Cryptorchidism; Esophageal atresia; Frontal bossing; Generalized hypotonia; Global developmental delay; Hemivertebrae; Horizontal nystagmus; Hypogonadotrophic hypogonadism; Hypoplasia of the corpus callosum; Hypospadias; Hypothalamic hamartoma; Microcephaly; Micropenis; Microphthalmia; Miosis; Missing ribs; Optic nerve hypoplasia; Patent ductus arteriosus; Postnatal growth retardation; Retinal dystrophy; Rib fusion; Sensorineural hearing impairment; Short stature; Spastic diplegia; Spastic tetraplegia; Specific learning disability; Supernumerary ribs; Ventricular septal defect; Vertebral fusion; Vertebral hypoplasia
SOX23q26.33100%gene with protein product184429Agenesis of corpus callosum; Anophthalmia; Anterior pituitary hypoplasia; Autosomal dominant inheritance; Butterfly vertebrae; Cleft palate; Coloboma; Cryptorchidism; Esophageal atresia; Frontal bossing; Generalized hypotonia; Global developmental delay; Hearing impairment; Hemiplegia/hemiparesis; Hemivertebrae; Hypogonadotrophic hypogonadism; Hypoplasia of penis; Hypoplasia of the corpus callosum; Hypospadias; Hypothalamic hamartoma; Microcephaly; Micropenis; Microphthalmia; Missing ribs; Nystagmus; Optic nerve hypoplasia; Patent ductus arteriosus; Postnatal growth retardation; Rib fusion; Seizures; Sensorineural hearing impairment; Septo-optic dysplasia; Short stature; Spastic diplegia; Spastic tetraplegia; Specific learning disability; Strabismus; Supernumerary ribs; Tracheoesophageal fistula; Ventricular septal defect; Vertebral fusion; Vertebral hypoplasia; Visual impairment; Visual lossDisorders of Sex Development
TBX616p11.2100%gene with protein product602427Anteverted nares; Autosomal dominant inheritance; Autosomal recessive inheritance; Butterfly vertebrae; Disproportionate short-trunk short stature; Hemivertebrae; Hyperlordosis; Intrauterine growth retardation; Low back pain; Missing ribs; Posterior rib fusion; Prominent occiput; Scoliosis; Severe short stature; Short neck; Short thorax; Supernumerary ribs; Upslanted palpebral fissure; Vertebral fusion; Vertebral segmentation defect; Wide nasal bridge
WASHC58q24.1399.95%gene with protein productformer name = KIAA0196610657SPG8, KIAA0196Abnormal mitral valve morphology; Abnormal tricuspid valve morphology; Abnormality of the fontanelles or cranial sutures; Adrenal hypoplasia; Adult onset; Anal atresia; Aortic valve stenosis; Aplasia/Hypoplasia of the cerebellum; Atrial septal defect; Atrioventricular canal defect; Autosomal dominant inheritance; Autosomal recessive inheritance; Babinski sign; Brachycephaly; Broad forehead; Cleft palate; Coloboma; Dandy-Walker malformation; Death in infancy; Degeneration of the lateral corticospinal tracts; Depressed nasal bridge; Double outlet right ventricle; Downslanted palpebral fissures; Frontal bossing; Generalized hypotonia; Global developmental delay; Growth hormone deficiency; Hemivertebrae; High forehead; High, narrow palate; Hydrocephalus; Hydronephrosis; Hyperreflexia; Hypertelorism; Hypoplastic left heart; Hypospadias; Impaired vibration sensation in the lower limbs; Insidious onset; Intellectual disability; Intrauterine growth retardation; Kyphosis; Low posterior hairline; Low-set ears; Lower limb muscle weakness; Lower limb spasticity; Macrocephaly; Micrognathia; Missing ribs; Muscular hypotonia; Neurological speech impairment; Pes cavus; Posterior fossa cyst; Progressive; Prominent occiput; Pulmonic stenosis; Recurrent respiratory infections; Scoliosis; Short nose; Short stature; Single umbilical artery; Spastic gait; Spastic paraplegia; Syndactyly; Tetralogy of Fallot; Urinary bladder sphincter dysfunction; Urinary incontinence; Urinary urgency; Ventricular septal defect; Wide nasal bridge
WNT317q21.31-q21100%gene with protein product165330INT4Abnormal lung lobation; Abnormal vertebral ossification; Abnormality of the diaphragm; Abnormality of the larynx; Absent external genitalia; Adrenal gland agenesis; Agenesis of corpus callosum; Anal atresia; Aplasia/Hypoplasia involving the nose; Aplasia/Hypoplasia involving the pelvis; Aplasia/Hypoplasia of the lungs; Aplasia/Hypoplasia of the nipples; Asplenia; Autosomal recessive inheritance; Cataract; Choanal atresia; Cleft palate; Cleft upper lip; Cryptorchidism; Gastroschisis; Heterogeneous; Hydrocephalus; Hypoplasia of the fallopian tube; Hypoplastic pelvis; Iris coloboma; Low-set ears; Microcornea; Micrognathia; Microphthalmia; Microtia; Missing ribs; Multicystic kidney dysplasia; Narrow mouth; Optic atrophy; Oral cleft; Peripheral pulmonary vessel aplasia; Polyhydramnios; Pulmonary hypoplasia; Renal agenesis; Septo-optic dysplasia; Single naris; Single umbilical artery; Tetraamelia; Tracheal stenosis; Urethral atresia; Vaginal atresia


The gene coverage data provided by GeneDx represent an estimate based on previous results, but the specific sequencing coverage data for the genes selected may vary from individual to individual, and cannot be predicted exactly. Changes to an approved gene list can only be made by contacting GeneDx directly at 888-729-1206 and asking to speak with a member of our Whole Exome Sequencing Laboratory.


  SUGGESTED CUSTOM SLICES  

Customize below OR enter Suggested Slice ID on printed requisition form
(e.g. 706 XomeDxSlice - Slice ID: CS-Albinism).

Suggested Slice IDSuggested Gene List Name
CS-AlbinismAlbinism
CS-AAAplastic Anemia
CS-AutoImmuneAutoimmune Disorders
CS-BBSBardet-Biedl Syndrome
CS-BMFBone Marrow Failure Syndromes
CS-CVIDCommon Variable Immune Deficiency
CS-CKUTCongenital Kidney and Urinary Tract (CKUT) Anomalies
CS-DSDDisorders of Sex Development
CS-EDEctodermal Dysplasia
CS-FAFanconi Anemia
CS-AnemiaHemolytic Anemia
CS-HeterotaxyHeterotaxy
CS-IBDInflammatory Bowel Disease
CS-MaleInfMale Infertility
CS-WWSMuscular dystropy-dystroglycanopathy (Walker-Warburg)
CS-NephroticNephrotic Syndrome
CS-ObesityObesity
CS-PPKCIPalmoplantar keratoderma plus congenital ichthyosis
CS-Primary ImmunodefPrimary Immunodeficiency
CS-RhabdoRhabdomyolysis
CS-SRTDShort-Rib Thoracic Dysplasia
CS-VACTERLVACTERL Association
CS-WSWaardenburg Syndrome