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Phenotypes
Lymphopenia

Select all: Gene symbolChrAvg % covered at 10xLocus TypeNoteOMIMPrevious symbol(s)Phenotype(s)Slice(s)
ADAMTS34q13.3100%gene with protein product605011Abnormality of dental morphology; Ascites; Broad forehead; Decreased antibody level in blood; Delayed eruption of teeth; Depressed nasal bridge; Epicanthus; Erysipelas; External ear malformation; Flat face; Gingival overgrowth; Glaucoma; Hypertelorism; Increased number of teeth; Intellectual disability; Low-set ears; Lymphadenopathy; Lymphangioma; Lymphedema; Lymphopenia; Malabsorption; Mild postnatal growth retardation; Narrow chest; Recurrent respiratory infections; Reduced number of teeth; Seizures; Splenomegaly; Wide nasal bridge
AK21p35.1100%gene with protein product103020Abnormality of mitochondrial metabolism; Abnormality of neutrophils; Anemia; Aplasia/Hypoplasia of the thymus; Autosomal recessive inheritance; Cellular immunodeficiency; Chronic otitis media; Combined immunodeficiency; Congenital agranulocytosis; Decreased antibody level in blood; Diarrhea; Failure to thrive; Fever; Hearing impairment; Hypoplasia of the thymus; Impaired T cell function; Lack of T cell function; Leukopenia; Lymphopenia; Malabsorption; Recurrent respiratory infections; Sepsis; Severe combined immunodeficiency; Weight lossAplastic Anemia ; Bone Marrow Failure Syndromes ; Primary Immunodeficiency
ATM11q22.399.93%gene with protein product607585ATA, ATDC, ATC, ATDAbnormal spermatogenesis; Abnormality of bone marrow cell morphology; Abnormality of chromosome stability; Abnormality of the hair; Anorexia; Aplasia/Hypoplasia of the thymus; Ataxia; Autosomal recessive inheritance; B-cell lymphoma; Bronchiectasis; Cafe-au-lait spot; Cellular immunodeficiency; Choreoathetosis; Conjunctival telangiectasia; Decreased antibody level in blood; Decreased proportion of CD4-positive T cells; Defective B cell differentiation; Delayed puberty; Diabetes mellitus; Dysarthria; Dystonia; Elevated alpha-fetoprotein; Elevated hepatic transaminases; Fatigue; Female hypogonadism; Fever; Gait disturbance; Glucose intolerance; Hodgkin lymphoma; Hypopigmentation of hair; Hypoplasia of the thymus; IgA deficiency; Immunoglobulin IgG2 deficiency; Leukemia; Lymphadenopathy; Lymphopenia; Mucosal telangiectasiae; Myoclonus; Neoplasm; Non-Hodgkin lymphoma; Nystagmus; Polycystic ovaries; Premature graying of hair; Recurrent bronchitis; Recurrent respiratory infections; Reduced tendon reflexes; Seizures; Short stature; Sinusitis; Skeletal muscle atrophy; Spasticity; Splenomegaly; Strabismus; Telangiectasia of the skin; Tremor; Weight lossAplastic Anemia ; Bone Marrow Failure Syndromes ; Primary Immunodeficiency
CCBE118q21.32100%gene with protein product612753Abnormality of dental morphology; Ascites; Atrial septal defect; Autosomal recessive inheritance; Bilateral single transverse palmar creases; Broad forehead; Camptodactyly; Conductive hearing impairment; Conical incisor; Coronal craniosynostosis; Cryptorchidism; Cutaneous finger syndactyly; Decreased antibody level in blood; Delayed eruption of teeth; Delayed skeletal maturation; Depressed nasal bridge; Ectopic kidney; Epicanthus; Erysipelas; External ear malformation; Flat face; Gingival overgrowth; Glaucoma; Hirsutism; Horseshoe kidney; Hydronephrosis; Hyperactivity; Hypertelorism; Hypoalbuminemia; Hypoplastic iliac wing; Increased number of teeth; Intellectual disability; Intestinal lymphangiectasia; Joint contracture of the hand; Low-set ears; Lymphadenopathy; Lymphangioma; Lymphedema; Lymphopenia; Malabsorption; Malar flattening; Mild postnatal growth retardation; Narrow chest; Narrow mouth; Narrow palate; Oligodontia; Pachygyria; Pectus excavatum; Pericardial effusion; Pericardial lymphangiectasia; Periorbital edema; Pleural effusion; Pleural lymphangiectasia; Protein-losing enteropathy; Rectal prolapse; Recurrent respiratory infections; Reduced number of teeth; Retrognathia; Scoliosis; Seizures; Sensorineural hearing impairment; Short foot; Short palm; Small hand; Smooth philtrum; Spina bifida occulta; Splenomegaly; Talipes equinovarus; Thyroid lymphangiectasia; Umbilical hernia; Ventricular septal defect; Vesicoureteral reflux; Wide nasal bridge
CD1916p11.2100%gene with protein product107265Anal atresia; Autoimmune thrombocytopenia; Autoimmunity; Autosomal dominant inheritance; Autosomal recessive inheritance; Brachycephaly; Bronchiectasis; Chronic otitis media; Conjunctivitis; Decreased antibody level in blood; Diarrhea; Elevated hepatic transaminases; Hemolytic anemia; Hepatomegaly; IgA deficiency; IgG deficiency; IgM deficiency; Immunodeficiency; Impaired T cell function; Lymphadenopathy; Lymphoma; Lymphopenia; Meningitis; Neoplasm; Pneumonia; Purpura; Recurrent bacterial infections; Recurrent bronchitis; Recurrent otitis media; Recurrent pneumonia; Recurrent sinusitis; SplenomegalyAutoimmune Disorders ; Common Variable Immune Deficiency
CD3D11q23.3100%gene with protein product186790T3DAutosomal recessive inheritance; Diarrhea; Failure to thrive; Immunodeficiency; Infantile onset; Lymphopenia; Recurrent otitis media; Recurrent respiratory infectionsPrimary Immunodeficiency
CD8111p15.599.74%gene with protein product186845TAPA1Anal atresia; Autoimmune thrombocytopenia; Autosomal recessive inheritance; Brachycephaly; Bronchiectasis; Chronic otitis media; Decreased antibody level in blood; Elevated hepatic transaminases; Hemolytic anemia; Immunodeficiency; Lymphadenopathy; Lymphopenia; Pneumonia; Purpura; Recurrent bacterial infections; Recurrent bronchitis; Recurrent respiratory infections; SplenomegalyAutoimmune Disorders ; Common Variable Immune Deficiency
CDCA72q31.1100%gene with protein product609937Abnormality of chromosome stability; Abnormality of neutrophils; Anemia; Autosomal recessive inheritance; Cellular immunodeficiency; Communicating hydrocephalus; Conductive hearing impairment; Cryptorchidism; Decreased antibody level in blood; Depressed nasal bridge; Flat face; Global developmental delay; Hypertelorism; Hypoplastic ischia; Hypospadias; Intellectual disability; Intrauterine growth retardation; Low-set ears; Lymphopenia; Macrocephaly; Malabsorption; Microcephaly; Micrognathia; Polydactyly; Recurrent respiratory infections; Short nose; Short stature; Strabismus
CHD78q12.2100%gene with protein product608892CRGAbnormal aortic valve morphology; Abnormal cardiac septum morphology; Abnormal lymphocyte morphology; Abnormality of body height; Abnormality of female internal genitalia; Abnormality of the soft palate; Abnormality of the voice; Absence of pubertal development; Absence of secondary sex characteristics; Alopecia; Anophthalmia; Anosmia; Anterior hypopituitarism; Anxiety; Aortic arch aneurysm; Aplasia/Hypoplasia of the earlobes; Aplasia/Hypoplasia of the eyebrow; Aplasia/Hypoplasia of the thymus; Atrial septal defect; Attention deficit hyperactivity disorder; Autism; Autosomal dominant inheritance; Bifid scrotum; Breast hypoplasia; Choanal atresia; Chorioretinal coloboma; Chronic diarrhea; Cleft lip; Cleft palate; Cleft upper lip; Coloboma; Cryptorchidism; Decreased fertility; Decreased testicular size; Decreased testosterone in males; Delayed eruption of teeth; Delayed puberty; Delayed skeletal maturation; Depressed nasal bridge; Depressivity; Desquamation of skin soon after birth; Dimple chin; Double outlet right ventricle; Downslanted palpebral fissures; Dry skin; Duodenal atresia; Dysphagia; Edema; Eosinophilia; Erectile abnormalities; Erythroderma; Esophageal atresia; Eunuchoid habitus; External ear malformation; Facial asymmetry; Facial palsy; Failure to thrive; Feeding difficulties; Feeding difficulties in infancy; Female hypogonadism; Fever; Gastroesophageal reflux; Global developmental delay; Gonadotropin deficiency; Gynecomastia; Hearing impairment; Hepatomegaly; Horseshoe kidney; Hydronephrosis; Hypocalcemia; Hypogonadotrophic hypogonadism; Hypoplasia of the ovary; Hypoplasia of the semicircular canal; Hypoplasia of the uterus; Hyposmia; Hypothalamic gonadotropin-releasing hormone deficiency; Hypothyroidism; Impotence; Increased female libido; Intellectual disability; Interrupted aortic arch; Iris coloboma; Labial hypoplasia; Low-set, posteriorly rotated ears; Lymphadenopathy; Lymphopenia; Malar flattening; Male hypogonadism; Micropenis; Microphthalmia; Muscular hypotonia; Narrow face; Narrow mouth; Non-obstructive azoospermia; Nystagmus; Obsessive-compulsive behavior; Optic atrophy; Osteopenia; Osteoporosis; Overfolded helix; Parathyroid hypoplasia; Patent ductus arteriosus; Phenotypic variability; Pneumonia; Polyhydramnios; Posterior choanal atresia; Postnatal growth retardation; Primary amenorrhea; Pruritus; Ptosis; Pulmonic stenosis; Reduced bone mineral density; Secondary amenorrhea; Sensorineural hearing impairment; Severe combined immunodeficiency; Short stature; Sparse body hair; Splenomegaly; Sporadic; Square face; Strabismus; Tetralogy of Fallot; Thickened skin; Tracheoesophageal fistula; Umbilical hernia; Ventricular septal defect; Wide intermamillary distanceDisorders of Sex Development; VACTERL Association
CORO1A16p11.292.41%gene with protein product605000Autosomal recessive inheritance; Global developmental delay; Hyperactivity; Immunodeficiency; Infantile onset; Lymphopenia; Recurrent respiratory infections
CR21q32.2100%gene with protein product120650Anal atresia; Autoimmune thrombocytopenia; Autoimmunity; Autosomal dominant inheritance; Autosomal recessive inheritance; Brachycephaly; Bronchiectasis; Chronic diarrhea; Chronic otitis media; Conjunctivitis; Decreased antibody level in blood; Diarrhea; Elevated hepatic transaminases; Hemolytic anemia; Hepatomegaly; IgA deficiency; IgG deficiency; IgM deficiency; Immunodeficiency; Impaired T cell function; Lymphadenopathy; Lymphoma; Lymphopenia; Meningitis; Neoplasm; Pneumonia; Purpura; Recurrent bacterial infections; Recurrent bronchitis; Recurrent otitis media; Recurrent pneumonia; Recurrent respiratory infections; Recurrent sinusitis; SplenomegalyAutoimmune Disorders ; Common Variable Immune Deficiency ; Disorders of Sex Development
CTPS11p34.2100%gene with protein product123860CTPSAutosomal recessive inheritance; Defective T cell proliferation; Immunodeficiency; Immunoglobulin IgG2 deficiency; Lymphopenia; Severe viral infections
DNMT3B20q11.21100%gene with protein product602900Abnormality of chromosome stability; Abnormality of neutrophils; Anemia; Anteverted nares; Autosomal recessive inheritance; Bronchiectasis; Cellular immunodeficiency; Chronic bronchitis; Communicating hydrocephalus; Decrease in T cell count; Decreased antibody level in blood; Depressed nasal bridge; Diarrhea; Epicanthus; Failure to thrive; Flat face; Global developmental delay; Hypertelorism; Immunodeficiency; Intellectual disability; Low-set ears; Lymphopenia; Macrocephaly; Macroglossia; Malabsorption; Malar flattening; Micrognathia; Pneumonia; Protruding tongue; Recurrent respiratory infections; Short nose; Short stature; Sinusitis
FAT44q28.1100%gene with protein product612411Abnormality of dental morphology; Ascites; Atresia of the external auditory canal; Autosomal recessive inheritance; Bifid scrotum; Blepharophimosis; Broad forehead; Clinodactyly; Conductive hearing impairment; Congenital onset; Cryptorchidism; Cutaneous finger syndactyly; Decreased antibody level in blood; Delayed eruption of teeth; Dental malocclusion; Depressed nasal bridge; Downturned corners of mouth; Epicanthus; Erysipelas; External ear malformation; Feeding difficulties; Flat face; Generalized hypotonia; Gingival overgrowth; Glaucoma; Growth delay; High palate; Hypertelorism; Hypoplasia of the corpus callosum; Hypoplasia of the maxilla; Hypospadias; Increased number of teeth; Intellectual disability; Irregular dentition; Joint laxity; Low-set ears; Lymphadenopathy; Lymphangioma; Lymphedema; Lymphopenia; Malabsorption; Malar flattening; Micrognathia; Micropenis; Microtia; Midface retrusion; Mild postnatal growth retardation; Narrow chest; Narrow forehead; Osteopenia; Pericardial lymphangiectasia; Ptosis; Pulmonary lymphangiectasia; Recurrent respiratory infections; Reduced number of teeth; Renal hypoplasia; Sacral dimple; Scoliosis; Seizures; Sensorineural hearing impairment; Short 4th metacarpal; Short clavicles; Short fourth metatarsal; Short palpebral fissure; Skeletal dysplasia; Splenomegaly; Talipes equinovarus; Tented upper lip vermilion; Tracheomalacia; Wide anterior fontanel; Wide cranial sutures; Wide nasal bridgeDisorders of Sex Development
G6PC317q21.31100%gene with protein product611045Anemia; Atrial septal defect; Autosomal recessive inheritance; Broad thumb; Cleft palate; Clinodactyly; Cryptorchidism; Erythroid hypoplasia; Failure to thrive; Growth delay; Hearing impairment; Hepatomegaly; High palate; Hypoplasia of the thymus; Lymphopenia; Microcephaly; Mitral regurgitation; Monocytosis; Neutropenia; Patent ductus arteriosus; Pectus carinatum; Phenotypic variability; Pulmonary arterial hypertension; Pulmonic stenosis; Recurrent bacterial infections; Recurrent respiratory infections; Respiratory insufficiency; Sepsis; Single transverse palmar crease; Splenomegaly; Thrombocytopenia; Varicose veins; Wide nasal bridgeAplastic Anemia ; Bone Marrow Failure Syndromes ; Inflammatory Bowel Disease
HELLS10q23.3397.82%gene with protein product603946Abnormality of chromosome stability; Abnormality of neutrophils; Anemia; Autosomal recessive inheritance; Cellular immunodeficiency; Communicating hydrocephalus; Congenital onset; Decreased antibody level in blood; Depressed nasal bridge; Epicanthus; Global developmental delay; Hypertelorism; Intellectual disability; Lymphopenia; Macrocephaly; Malabsorption; Micrognathia; Recurrent infections; Recurrent respiratory infections; Short stature
ICOS2q33.2100%gene with protein product604558Anal atresia; Autoimmune thrombocytopenia; Autoimmunity; Autosomal dominant inheritance; Autosomal recessive inheritance; B lymphocytopenia; Brachycephaly; Bronchiectasis; Chronic otitis media; Conjunctivitis; Decreased antibody level in blood; Diarrhea; Elevated hepatic transaminases; Hemolytic anemia; Hepatomegaly; IgA deficiency; IgG deficiency; IgM deficiency; Immunodeficiency; Impaired T cell function; Lymphadenopathy; Lymphoma; Lymphopenia; Meningitis; Neoplasm; Pneumonia; Purpura; Recurrent bacterial infections; Recurrent bronchitis; Recurrent otitis media; Recurrent pneumonia; Recurrent sinusitis; SplenomegalyAutoimmune Disorders ; Common Variable Immune Deficiency ; Inflammatory Bowel Disease
MS4A111q12.2100%gene with protein product112210CD20Anal atresia; Autoimmune thrombocytopenia; Autosomal recessive inheritance; Brachycephaly; Bronchiectasis; Chronic otitis media; Decreased antibody level in blood; Elevated hepatic transaminases; Hemolytic anemia; Immunodeficiency; Lymphadenopathy; Lymphopenia; Pneumonia; Purpura; Recurrent bacterial infections; Recurrent bronchitis; Recurrent respiratory infections; SplenomegalyAutoimmune Disorders ; Common Variable Immune Deficiency
MSNXq12100%gene with protein product309845Decreased antibody level in blood; Eczema; Lymphopenia; Recurrent respiratory infections; Recurrent urinary tract infections; X-linked recessive inheritance
NFKB14q24100%gene with protein product164011Anal atresia; Autoimmune thrombocytopenia; Autosomal dominant inheritance; Brachycephaly; Bronchiectasis; Chronic obstructive pulmonary disease; Chronic otitis media; Decreased antibody level in blood; Elevated hepatic transaminases; Hemolytic anemia; Immunodeficiency; Lymphadenopathy; Lymphopenia; Pneumonia; Purpura; Recurrent bronchitis; Recurrent sinopulmonary infections; Recurrent skin infections; Splenomegaly; Variable expressivityAutoimmune Disorders ; Common Variable Immune Deficiency ; Ectodermal Dysplasia ; Hemolytic Anemia
NFKB210q24.3299.99%gene with protein product164012Abnormal size of pituitary gland; Abnormality of the periungual region; Adrenocorticotropin deficient adrenal insufficiency; Anal atresia; Asthma; Autoimmune thrombocytopenia; Autosomal dominant inheritance; Brachycephaly; Bronchiectasis; Central adrenal insufficiency; Chronic otitis media; Decreased antibody level in blood; Decreased circulating ACTH level; Decreased circulating cortisol level; Elevated hepatic transaminases; Fatigue; Hemolytic anemia; Hypoglycemic coma; Hyponatremia; Hypotension; Immunodeficiency; Lymphadenopathy; Lymphopenia; Nail dystrophy; Pneumonia; Purpura; Recurrent bronchitis; Recurrent hypoglycemia; Recurrent otitis media; Recurrent pharyngitis; Recurrent pneumonia; Recurrent respiratory infections; Recurrent sinusitis; Severe B lymphocytopenia; Severe viral infections; Splenomegaly; Variable expressivityAutoimmune Disorders ; Common Variable Immune Deficiency
PGM36q14.1100%gene with protein product172100Allergic rhinitis; Asthma; Ataxia; Autosomal recessive inheritance; Bronchiectasis; Cognitive impairment; Conductive hearing impairment; Cortical myoclonus; Dysarthria; Eczema; Generalized hypotonia; Global developmental delay; High palate; Immunodeficiency; Intellectual disability; Lymphopenia; Neutropenia; Recurrent respiratory infections; Scoliosis; Sensorineural hearing impairment; Sensory impairment; Vasculitis in the skinBone Marrow Failure Syndromes
PNP14q11.2100%gene with protein product164050NPAbnormality of B cell physiology; Ataxia; Autoimmune hemolytic anemia; Autoimmune neutropenia; Autoimmune thrombocytopenia; Autosomal recessive inheritance; Behavioral abnormality; Cerebral vasculitis; Failure to thrive; Generalized hypotonia; Hypouricemia; Impaired T cell function; Intellectual disability; Lymph node hypoplasia; Lymphoma; Lymphopenia; Motor delay; Otitis media; Pneumonia; Recurrent bacterial infections; Recurrent lower respiratory tract infections; Recurrent opportunistic infections; Recurrent upper respiratory tract infections; Recurrent urinary tract infections; Recurrent viral infections; Sinusitis; Spastic diplegia; Splenomegaly; Tetraparesis; TremorAutoimmune Disorders ; Obesity; Palmoplantar keratoderma plus congenital ichthyosis; Primary Immunodeficiency; Rhabdomyolysis
PRKCD3p21.1100%gene with protein product176977Anal atresia; Arthralgia; Autoimmune thrombocytopenia; Autosomal recessive inheritance; Brachycephaly; Bronchiectasis; Chronic otitis media; Decreased antibody level in blood; Elevated hepatic transaminases; Hemolytic anemia; Hepatomegaly; Immunodeficiency; Infantile onset; Lymphadenopathy; Lymphopenia; Membranous nephropathy; Nephrotic syndrome; Pneumonia; Purpura; Recurrent bronchitis; Recurrent infections; SplenomegalyAutoimmune Disorders ; Common Variable Immune Deficiency
RMRP9p13.3RNA, miscXomeDxSlice is not appropriate. This gene is available on our menu: https://www.genedx.com/test-catalog/available-tests/rmrp-gene-sequencing-1/157660CHHAbnormal cardiac septum morphology; Abnormal lymphocyte morphology; Abnormal vertebral ossification; Abnormality of epiphysis morphology; Abnormality of pelvic girdle bone morphology; Abnormality of retinal pigmentation; Abnormality of the distal phalanx of finger; Abnormality of the hair; Abnormality of the hip bone; Abnormality of the immune system; Abnormality of the palate; Abnormality of the pancreas; Abnormality of the vertebral column; Aganglionic megacolon; Alopecia; Aplasia/Hypoplasia of the eyebrow; Autosomal recessive inheritance; Biconvex vertebral bodies; Blue sclerae; Brachydactyly; Cardiomyopathy; Cellular immunodeficiency; Cervical cord compression; Cervical subluxation; Chronic diarrhea; Cone-shaped epiphyses of the phalanges of the hand; Congenital hypoplastic anemia; Convex nasal ridge; Delayed ossification of carpal bones; Depressed nasal bridge; Desquamation of skin soon after birth; Diaphyseal thickening; Dry skin; Edema; EEG abnormality; Eosinophilia; Erythroderma; Esophageal atresia; Failure to thrive; Fair hair; Femoral bowing; Fever; Fine hair; Flared metaphysis; Flaring of lower rib cage; Genu varum; Gingival overgrowth; Hepatomegaly; High hypermetropia; Hyperlordosis; Hypertelorism; Hypocalcemia; Hypodontia; Hypoplastic ilia; Impaired lymphocyte transformation with phytohemagglutinin; Intellectual disability; J-shaped sella turcica; Joint hypermobility; Joint laxity; Large face; Limited elbow extension; Low-set, posteriorly rotated ears; Lumbar hyperlordosis; Lymphadenopathy; Lymphopenia; Macrocytic anemia; Malabsorption; Mesomelia; Metaphyseal chondrodysplasia; Metaphyseal cupping; Metaphyseal cupping of metacarpals; Metaphyseal dysplasia; Metaphyseal irregularity; Metaphyseal widening; Micromelia; Mucopolysacchariduria; Muscular hypotonia; Myopia; Narrow chest; Narrow vertebral interpedicular distance; Neonatal short-limb short stature; Neoplasm of the skin; Neutropenia; Platyspondyly; Pneumonia; Prominent forehead; Pruritus; Reduced tendon reflexes; Respiratory insufficiency; Rhizomelia; Scoliosis; Severe combined immunodeficiency; Severe short stature; Short finger; Short long bone; Short metacarpal; Short neck; Short palm; Short toe; Small epiphyses; Sparse and thin eyebrow; Sparse eyelashes; Sparse facial hair; Sparse hair; Spinal dysraphism; Splenomegaly; Strabismus; Susceptibility to chickenpox; Thickened skin; Tibial bowing; Tracheal stenosis; Visual impairment
SEMA3E7q21.11100%gene with protein product608166SEMAHAbnormal aortic valve morphology; Abnormal cardiac septum morphology; Abnormality of female internal genitalia; Abnormality of the soft palate; Anophthalmia; Anosmia; Anterior hypopituitarism; Aortic arch aneurysm; Aplasia/Hypoplasia of the earlobes; Aplasia/Hypoplasia of the thymus; Atrial septal defect; Attention deficit hyperactivity disorder; Autism; Autosomal dominant inheritance; Autosomal recessive inheritance; Bifid scrotum; Choanal atresia; Chorioretinal coloboma; Cleft palate; Cleft upper lip; Coloboma; Cryptorchidism; Decreased testicular size; Delayed eruption of teeth; Delayed puberty; Depressed nasal bridge; Dimple chin; Double outlet right ventricle; Downslanted palpebral fissures; Duodenal atresia; Dysphagia; Esophageal atresia; External ear malformation; Facial asymmetry; Facial palsy; Feeding difficulties; Feeding difficulties in infancy; Gastroesophageal reflux; Global developmental delay; Gonadotropin deficiency; Gynecomastia; Hearing impairment; Horseshoe kidney; Hydronephrosis; Hypocalcemia; Hypogonadotrophic hypogonadism; Hypoplasia of the semicircular canal; Hypothyroidism; Intellectual disability; Interrupted aortic arch; Iris coloboma; Labial hypoplasia; Low-set, posteriorly rotated ears; Lymphopenia; Malar flattening; Micropenis; Microphthalmia; Muscular hypotonia; Narrow face; Narrow mouth; Nystagmus; Obsessive-compulsive behavior; Optic atrophy; Overfolded helix; Parathyroid hypoplasia; Patent ductus arteriosus; Phenotypic variability; Polyhydramnios; Posterior choanal atresia; Postnatal growth retardation; Primary amenorrhea; Ptosis; Pulmonic stenosis; Short stature; Sparse axillary hair; Sparse pubic hair; Sporadic; Square face; Strabismus; Tetralogy of Fallot; Umbilical hernia; Ventricular septal defect
SMARCAL12q35100%gene with protein product606622Abnormal immunoglobulin level; Abnormal T cell morphology; Abnormality of epiphysis morphology; Anemia; Arteriosclerosis; Astigmatism; Autosomal recessive inheritance; Bulbous nose; Cellular immunodeficiency; Coarse hair; Depressed nasal bridge; Disproportionate short-trunk short stature; Fine hair; Focal segmental glomerulosclerosis; Glomerulopathy; High pitched voice; Hip dislocation; Hyperlordosis; Hypermelanotic macule; Hypertension; Hypoplasia of the capital femoral epiphysis; Increased thyroid-stimulating hormone level; Intrauterine growth retardation; Lateral displacement of the femoral head; Lumbar hyperlordosis; Lymphopenia; Melanocytic nevus; Microdontia; Motor delay; Multiple cafe-au-lait spots; Myopia; Nephrotic syndrome; Neutropenia; Opacification of the corneal stroma; Osteopenia; Ovoid vertebral bodies; Platyspondyly; Proteinuria; Protuberant abdomen; Recurrent infections; Renal insufficiency; Shallow acetabular fossae; Short neck; Spondyloepiphyseal dysplasia; Thoracic kyphosis; Thrombocytopenia; Transient ischemic attack; Waddling gaitNephrotic Syndrome
SMARCAL12q35100%gene with protein product606622Abnormal immunoglobulin level; Abnormal T cell morphology; Abnormality of epiphysis morphology; Anemia; Arteriosclerosis; Astigmatism; Autosomal recessive inheritance; Bulbous nose; Cellular immunodeficiency; Coarse hair; Depressed nasal bridge; Disproportionate short-trunk short stature; Fine hair; Focal segmental glomerulosclerosis; Glomerulopathy; High pitched voice; Hip dislocation; Hyperlordosis; Hypermelanotic macule; Hypertension; Hypoplasia of the capital femoral epiphysis; Increased thyroid-stimulating hormone level; Intrauterine growth retardation; Lateral displacement of the femoral head; Lumbar hyperlordosis; Lymphopenia; Melanocytic nevus; Microdontia; Motor delay; Multiple cafe-au-lait spots; Myopia; Nephrotic syndrome; Neutropenia; Opacification of the corneal stroma; Osteopenia; Ovoid vertebral bodies; Platyspondyly; Proteinuria; Protuberant abdomen; Recurrent infections; Renal insufficiency; Shallow acetabular fossae; Short neck; Spondyloepiphyseal dysplasia; Thoracic kyphosis; Thrombocytopenia; Transient ischemic attack; Waddling gaitNephrotic Syndrome
STAT12q32.2100%gene with protein product600555Autoimmune hemolytic anemia; Autosomal dominant inheritance; Autosomal recessive inheritance; B lymphocytopenia; Bronchiectasis; Carotid artery dilatation; Chronic mucocutaneous candidiasis; Delayed puberty; Delayed skeletal maturation; Diarrhea; Dilatation of the cerebral artery; Eczema; Enterocolitis; Functional abnormality of the bladder; Generalized osteoporosis; Hepatosplenomegaly; Herpes simplex encephalitis; Immune dysregulation; Immunodeficiency; Incomplete penetrance; Lymphopenia; Osteopenia; Phenotypic variability; Primary hypothyroidism; Recurrent mycobacterial infections; Recurrent respiratory infections; Recurrent upper respiratory tract infections; Renal artery stenosis; Renovascular hypertension; Short stature; Susceptibility to herpesvirus; Thyroiditis; Type I diabetes mellitus; Villous atrophyAutoimmune Disorders ; Inflammatory Bowel Disease
STK420q13.12100%gene with protein product604965Atrial septal defect; Autosomal recessive inheritance; Immunodeficiency; Lymphopenia; Neutropenia; Recurrent bacterial infections; Recurrent fungal infections; Recurrent viral infections; Verrucae
TCN222q12.2100%gene with protein product613441Abnormality of chromosome stability; Abnormality of the mouth; Acute kidney injury; Ataxia; Autosomal recessive inheritance; Diarrhea; Failure to thrive; IgA deficiency; IgG deficiency; IgM deficiency; Intellectual disability; Irritability; Lethargy; Lymphopenia; Macrocytic anemia; Megaloblastic bone marrow; Methylmalonic aciduria; Muscle weakness; Neutropenia; Pancytopenia; Reticulocytopenia; Thrombocytopenia; Vomiting
TERC3q26.2100%RNA, miscRNA gene specifically targeted for capture602322Abnormal blistering of the skin; Abnormality of coagulation; Abnormality of female internal genitalia; Abnormality of neutrophils; Abnormality of the fingernails; Abnormality of the pharynx; Alopecia; Anemia; Anorectal anomaly; Aplasia/Hypoplasia of the skin; Aplastic anemia; Aplastic/hypoplastic toenail; Ataxia; Autosomal dominant inheritance; Bone marrow hypocellularity; Bronchiectasis; Carious teeth; Cellular immunodeficiency; Cerebellar hypoplasia; Cirrhosis; Clubbing of fingers; Cough; Dermal atrophy; Esophageal stenosis; Exertional dyspnea; Gastroesophageal reflux; Global developmental delay; Ground-glass opacification on pulmonary HRCT; Honeycomb lung; Hyperhidrosis; Hypermelanotic macule; Hypodontia; Hypopigmented skin patches; Interstitial pneumonitis; Intrauterine growth retardation; Lymphopenia; Malabsorption; Myelodysplasia; Nail dystrophy; Nail pits; Oral leukoplakia; Osteoporosis; Periodontitis; Phenotypic variability; Premature graying of hair; Premature loss of teeth; Pulmonary fibrosis; Rales; Recurrent fractures; Recurrent respiratory infections; Reticular hyperpigmentation; Reticular pattern on pulmonary HRCT; Ridged nail; Rough bone trabeculation; Short stature; Skin ulcer; Sparse hair; Specific learning disability; Squamous cell carcinoma of the skin; Taurodontia; Telangiectasia of the skin; Thrombocytopenia; Tracheoesophageal fistula; Urethral stenosisAplastic Anemia ; Bone Marrow Failure Syndromes ; Palmoplantar keratoderma plus congenital ichthyosis
TERT5p15.33100%gene with protein product187270Abnormal blistering of the skin; Abnormality of coagulation; Abnormality of female internal genitalia; Abnormality of neutrophils; Abnormality of the fingernails; Abnormality of the hair; Abnormality of the lymphatic system; Abnormality of the pharynx; Alopecia; Alveolar cell carcinoma; Anemia; Anorectal anomaly; Aplasia/Hypoplasia of the skin; Aplastic anemia; Aplastic/hypoplastic toenail; Ataxia; Autosomal dominant inheritance; Bone marrow hypocellularity; Bronchiectasis; Carious teeth; Cellular immunodeficiency; Cerebellar hypoplasia; Cerebral cortical atrophy; Cirrhosis; Clubbing of fingers; Cough; Dermal atrophy; Dry skin; Esophageal stenosis; Excessive wrinkled skin; Exertional dyspnea; Failure to thrive; Freckling; Gastroesophageal reflux; Generalized hyperpigmentation; Generalized hypopigmentation of hair; Global developmental delay; Ground-glass opacification on pulmonary HRCT; Honeycomb lung; Hyperhidrosis; Hypermelanotic macule; Hypertonia; Hypodontia; Hypopigmented skin patches; Immunodeficiency; Increased antibody level in blood; Intellectual disability; Interstitial pneumonitis; Intrauterine growth retardation; Lymphopenia; Malabsorption; Melanoma; Microcephaly; Myelodysplasia; Nail dystrophy; Nail pits; Nevus; Oral leukoplakia; Osteoporosis; Periodontitis; Phenotypic variability; Pneumonia; Premature graying of hair; Premature loss of teeth; Pulmonary arterial hypertension; Pulmonary fibrosis; Rales; Recurrent fractures; Recurrent respiratory infections; Reticular hyperpigmentation; Reticular pattern on pulmonary HRCT; Ridged nail; Rough bone trabeculation; Short stature; Skin ulcer; Sparse hair; Sparse scalp hair; Specific learning disability; Squamous cell carcinoma of the skin; Taurodontia; Telangiectasia of the skin; Thrombocytopenia; Tracheoesophageal fistula; Urethral stenosis; VentriculomegalyAplastic Anemia ; Bone Marrow Failure Syndromes ; Palmoplantar keratoderma plus congenital ichthyosis
TFR27q22.1100%gene with protein product604720Amenorrhea; Anemia; Arthritis; Autosomal recessive inheritance; Cardiomyopathy; Cirrhosis; Elevated hepatic transaminases; Fatigue; Hyperpigmentation of the skin; Hypogonadotrophic hypogonadism; Impotence; Increased serum ferritin; Increased serum iron; Lymphopenia; Neutropenia
TINF214q12100%gene with protein product604319Abnormal blistering of the skin; Abnormality of coagulation; Abnormality of female internal genitalia; Abnormality of metabolism/homeostasis; Abnormality of neutrophils; Abnormality of the fingernails; Abnormality of the pharynx; Alopecia; Anemia; Anorectal anomaly; Aplasia/Hypoplasia of the skin; Aplastic anemia; Aplastic/hypoplastic toenail; Ataxia; Autosomal dominant inheritance; Bone marrow hypocellularity; Carious teeth; Cellular immunodeficiency; Cerebellar hypoplasia; Cerebral calcification; Cerebral cortical atrophy; Cirrhosis; Cryptorchidism; Delayed speech and language development; Dermal atrophy; Dry skin; Epiphora; Esophageal stenosis; Excessive wrinkled skin; Exudative retinopathy; Failure to thrive; Fine hair; Fine, reticulate skin pigmentation; Generalized hyperpigmentation; Generalized hypopigmentation of hair; Global developmental delay; Hearing impairment; Hyperhidrosis; Hypermelanotic macule; Hypertonia; Hypodontia; Hypopigmented skin patches; Immunodeficiency; Intellectual disability; Interstitial pneumonitis; Intrauterine growth retardation; Leukocoria; Leukopenia; Lymphopenia; Malabsorption; Megalocornea; Microcephaly; Myelodysplasia; Nail dysplasia; Nail dystrophy; Nail pits; Nystagmus; Oral leukoplakia; Osteoporosis; Periodontitis; Phenotypic variability; Premature graying of hair; Premature loss of teeth; Progressive neurologic deterioration; Pulmonary fibrosis; Recurrent fractures; Recurrent respiratory infections; Reticular hyperpigmentation; Reticulated skin pigmentation; Retinopathy; Ridged fingernail; Ridged nail; Rough bone trabeculation; Short stature; Skin ulcer; Sparse hair; Sparse scalp hair; Specific learning disability; Sporadic; Squamous cell carcinoma of the skin; Taurodontia; Telangiectasia of the skin; Thrombocytopenia; Tracheoesophageal fistula; Urethral stenosis; VentriculomegalyAplastic Anemia ; Bone Marrow Failure Syndromes
TNFRSF13B17p11.2100%gene with protein product604907Anal atresia; Autoimmune thrombocytopenia; Autoimmunity; Autosomal dominant inheritance; Autosomal recessive inheritance; Brachycephaly; Bronchiectasis; Chronic otitis media; Conjunctivitis; Decreased antibody level in blood; Diarrhea; Elevated hepatic transaminases; Hemolytic anemia; Hepatomegaly; IgA deficiency; IgG deficiency; IgM deficiency; Immunodeficiency; Impaired T cell function; Lymphadenopathy; Lymphoma; Lymphopenia; Meningitis; Neoplasm; Pneumonia; Purpura; Recurrent bacterial infections; Recurrent bronchitis; Recurrent infection of the gastrointestinal tract; Recurrent otitis media; Recurrent pneumonia; Recurrent sinopulmonary infections; Recurrent sinusitis; SplenomegalyAutoimmune Disorders ; Common Variable Immune Deficiency ; Primary Immunodeficiency
TNFRSF13C22q13.2100%gene with protein product606269Adult onset; Anal atresia; Autoimmune thrombocytopenia; Autoimmunity; Autosomal dominant inheritance; Autosomal recessive inheritance; Brachycephaly; Bronchiectasis; Chronic otitis media; Conjunctivitis; Decreased antibody level in blood; Diarrhea; Elevated hepatic transaminases; Hemolytic anemia; Hepatomegaly; IgA deficiency; IgG deficiency; IgM deficiency; Immunodeficiency; Impaired T cell function; Lymphadenopathy; Lymphoma; Lymphopenia; Meningitis; Neoplasm; Phenotypic variability; Pneumonia; Purpura; Recurrent bacterial infections; Recurrent bronchitis; Recurrent otitis media; Recurrent pneumonia; Recurrent sinusitis; SplenomegalyAutoimmune Disorders ; Common Variable Immune Deficiency
TNFSF1217p13.1100%gene with protein product602695Anal atresia; Autoimmune thrombocytopenia; Brachycephaly; Bronchiectasis; Chronic otitis media; Decreased antibody level in blood; Elevated hepatic transaminases; Hemolytic anemia; Immunodeficiency; Lymphadenopathy; Lymphopenia; Pneumonia; Purpura; Recurrent bronchitis; SplenomegalyAutoimmune Disorders ; Common Variable Immune Deficiency
TPP213q33.199.98%gene with protein product190470Autoimmune hemolytic anemia; Autoimmune thrombocytopenia; Hemiparesis; Hepatitis; Lymphadenopathy; Lymphopenia; Moderate global developmental delay; Recurrent otitis media; Respiratory tract infection; Splenomegaly; Stroke; Systemic lupus erythematosusAutoimmune Disorders
UNC11917q11.2100%gene with protein product604011Abnormality of color vision; Abnormality of retinal pigmentation; Autosomal dominant inheritance; Bronchiolitis obliterans organizing pneumonia; Immunodeficiency; Lymphopenia; Nyctalopia; Photophobia; Recurrent otitis media; Recurrent sinusitis
WASXp11.2399.19%gene with protein product300392IMD2, THC, WASPAbnormal platelet morphology; Abnormality of eosinophils; Abnormality of the musculature; Abnormality of the skin; Autoimmunity; Bruising susceptibility; Chronic diarrhea; Chronic obstructive pulmonary disease; Chronic otitis media; Congenital neutropenia; Congenital thrombocytopenia; Decreased mean platelet volume; Dyspnea; Eczema; Epistaxis; Fatigue; Fever; Hematemesis; Hematochezia; Hemolytic anemia; Immunodeficiency; Increased IgA level; Increased IgE level; Inflammation of the large intestine; Intermittent thrombocytopenia; Joint hemorrhage; Lymphopenia; Microcytic anemia; Monocytopenia; Neutropenia; Petechiae; Prolonged bleeding time; Recurrent bacterial infections; Recurrent respiratory infections; Sinusitis; Specific learning disability; Spontaneous hematomas; Thrombocytopenia; X-linked recessive inheritanceAplastic Anemia ; Autoimmune Disorders ; Bone Marrow Failure Syndromes ; Common Variable Immune Deficiency ; Inflammatory Bowel Disease ; Primary Immunodeficiency
WIPF12q31.1100%gene with protein product602357WASPIPAbnormal platelet morphology; Abnormality of eosinophils; Autoimmunity; Autosomal recessive inheritance; Bruising susceptibility; Chronic diarrhea; Chronic obstructive pulmonary disease; Chronic otitis media; Decreased proportion of CD8-positive T cells; Dyspnea; Eczema; Fatigue; Fever; Hematemesis; Hematochezia; Hemolytic anemia; Immunodeficiency; Inflammation of the large intestine; Lymphopenia; Microcytic anemia; Petechiae; Prolonged bleeding time; Recurrent infections; Recurrent respiratory infections; Reduced natural killer cell activity; Sinusitis; Specific learning disability; Spontaneous hematomas; ThrombocytopeniaBone Marrow Failure Syndromes
XRCC45q14.2100%gene with protein product194363Abnormality of chromosome stability; Abnormality of lipid metabolism; Acanthosis nigricans; Acute leukemia; Autosomal recessive inheritance; Biparietal narrowing; Bird-like facies; Brachycephaly; Broad nasal tip; Broad-based gait; Cerebellar vermis atrophy; Cognitive impairment; Convex nasal ridge; Cortical gyral simplification; Cryptorchidism; Cutaneous photosensitivity; Deeply set eye; Delayed speech and language development; Diabetes mellitus; Dysarthria; Dysdiadochokinesis; Dysmetria; Ectopic kidney; Epicanthus; Erythema; Global developmental delay; Growth delay; Hepatic steatosis; High forehead; High pitched voice; Hypertriglyceridemia; Hypotelorism; Hypothyroidism; Inguinal hernia; Insulin resistance; Insulin-resistant diabetes mellitus; Intellectual disability; Intrauterine growth retardation; Large beaked nose; Limb undergrowth; Long face; Long nose; Low anterior hairline; Lymphoma; Lymphopenia; Malar prominence; Microcephaly; Micrognathia; Micropenis; Misalignment of teeth; Nystagmus; Pancytopenia; Primary gonadal insufficiency; Prominent nasal bridge; Renal hypoplasia; Sensory neuropathy; Severe combined immunodeficiency; Severe short-limb dwarfism; Short chin; Short stature; Sloping forehead; Telecanthus; Thin vermilion border; Triangular face; Unilateral renal agenesis; Upslanted palpebral fissure; Ventriculomegaly; Wide nasal bridgeObesity
ZBTB246q21100%gene with protein product614064ZNF450Abnormality of chromosome stability; Abnormality of neutrophils; Anemia; Anteverted nares; Autosomal recessive inheritance; Cellular immunodeficiency; Chronic bronchitis; Communicating hydrocephalus; Congenital onset; Decreased antibody level in blood; Depressed nasal bridge; Epicanthus; Global developmental delay; Growth delay; High palate; Hypertelorism; Immunodeficiency; Intellectual disability; Low-set ears; Lymphopenia; Macrocephaly; Malabsorption; Micrognathia; Motor delay; Pneumonia; Recurrent respiratory infections; Retrognathia; Round face; Short chin; Short nose; Short stature


The gene coverage data provided by GeneDx represent an estimate based on previous results, but the specific sequencing coverage data for the genes selected may vary from individual to individual, and cannot be predicted exactly. Changes to an approved gene list can only be made by contacting GeneDx directly at 888-729-1206 and asking to speak with a member of our Whole Exome Sequencing Laboratory.


  SUGGESTED CUSTOM SLICES  

Customize below OR enter Suggested Slice ID on printed requisition form
(e.g. 706 XomeDxSlice - Slice ID: CS-Albinism).

Suggested Slice IDSuggested Gene List Name
CS-AlbinismAlbinism
CS-AAAplastic Anemia
CS-AutoImmuneAutoimmune Disorders
CS-BBSBardet-Biedl Syndrome
CS-BMFBone Marrow Failure Syndromes
CS-CVIDCommon Variable Immune Deficiency
CS-CKUTCongenital Kidney and Urinary Tract (CKUT) Anomalies
CS-DSDDisorders of Sex Development
CS-EDEctodermal Dysplasia
CS-FAFanconi Anemia
CS-AnemiaHemolytic Anemia
CS-HeterotaxyHeterotaxy
CS-IBDInflammatory Bowel Disease
CS-MaleInfMale Infertility
CS-WWSMuscular dystropy-dystroglycanopathy (Walker-Warburg)
CS-NephroticNephrotic Syndrome
CS-ObesityObesity
CS-PPKCIPalmoplantar keratoderma plus congenital ichthyosis
CS-Primary ImmunodefPrimary Immunodeficiency
CS-RhabdoRhabdomyolysis
CS-SRTDShort-Rib Thoracic Dysplasia
CS-VACTERLVACTERL Association
CS-WSWaardenburg Syndrome