XomeDxSlice Tool

Now Available - NEW XomeDxSlice Xpanded – Custom slice testing with trio analysis for lists >150 genes.

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SELECTED GENES FOR YOUR SLICE

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Phenotypes
Hand oligodactyly

Select all: Gene symbolChrAvg % covered at 10xLocus TypeNoteOMIMPrevious symbol(s)Phenotype(s)Slice(s)
ESCO28p21.1100%gene with protein product609353RBSAbnormality of cardiovascular system morphology; Abnormality of the metacarpal bones; Absent earlobe; Absent radius; Accessory spleen; Ankle contracture; Aortic valve stenosis; Aplasia of the ulna; Aplasia/Hypoplasia of the thumb; Atrial septal defect; Autosomal recessive inheritance; Bicornuate uterus; Biliary tract abnormality; Blue sclerae; Bowing of the long bones; Brachycephaly; Brachydactyly; Cafe-au-lait spot; Cataract; Cleft palate; Cleft upper lip; Clinodactyly; Clinodactyly of the 5th finger; Clitoral hypertrophy; Complete duplication of thumb phalanx; Cranial nerve paralysis; Craniosynostosis; Cryptorchidism; Cystic hygroma; Downslanted palpebral fissures; Elbow flexion contracture; Enlarged labia minora; External ear malformation; Eyelid coloboma; Fair hair; Frontal encephalocele; Global developmental delay; Hand oligodactyly; High palate; Hip contracture; Horseshoe kidney; Hydrocephalus; Hypertelorism; Hypoplasia of the radius; Hypospadias; Intellectual disability; Intrauterine growth retardation; Knee flexion contracture; Long penis; Low-set ears; Malar flattening; Mesomelic arm shortening; Microcephaly; Micrognathia; Microphthalmia; Midface capillary hemangioma; Narrow naris; Opacification of the corneal stroma; Patent ductus arteriosus; Phocomelia; Polycystic kidney dysplasia; Polyhydramnios; Posteriorly rotated ears; Postnatal growth retardation; Premature birth; Premature separation of centromeric heterochromatin; Proptosis; Proximal placement of thumb; Radial deviation of finger; Radioulnar synostosis; Seizures; Severe intrauterine growth retardation; Shallow orbits; Short neck; Short stature; Short thumb; Sparse hair; Syndactyly; Talipes equinovalgus; Tetraphocomelia; Underdeveloped nasal alae; Underdeveloped supraorbital ridges; Ventricular septal defect; Wide nasal bridge; Wormian bones; Wrist flexion contracture
NIPBL5p13.299.9%gene with protein product6086672-3 toe syndactyly; Abnormality of the umbilicus; Abnormally low-pitched voice; Anteverted nares; Anxiety; Astigmatism; Atresia of the external auditory canal; Attention deficit hyperactivity disorder; Autosomal dominant inheritance; Behavioral abnormality; Bilateral single transverse palmar creases; Blepharitis; Brachycephaly; Choanal atresia; Cleft palate; Cleft upper lip; Clinodactyly of the 5th finger; Conductive hearing impairment; Congenital diaphragmatic hernia; Cryptorchidism; Curly eyelashes; Cutis marmorata; Delayed eruption of teeth; Delayed skeletal maturation; Delayed speech and language development; Depressed nasal bridge; Dislocated radial head; Downturned corners of mouth; Duplication of internal organs; Ectopic kidney; Elbow dislocation; Elbow flexion contracture; Failure to thrive; Feeding difficulties in infancy; Gastroesophageal reflux; Generalized hirsutism; Hand oligodactyly; Hiatus hernia; High palate; High, narrow palate; Highly arched eyebrow; Hirsutism; Hypertonia; Hypoplasia of penis; Hypoplasia of the radius; Hypoplastic labia majora; Hypoplastic male external genitalia; Hypoplastic nipples; Hypoplastic radial head; Hypospadias; Inguinal hernia; Intellectual disability; Intellectual disability, severe; Intrauterine growth retardation; Joint stiffness; Limited elbow extension; Long eyelashes; Long philtrum; Low anterior hairline; Low posterior hairline; Low-set ears; Low-set, posteriorly rotated ears; Malrotation of colon; Microcephaly; Microcornea; Micrognathia; Micromelia; Multicystic kidney dysplasia; Myopia; Neurological speech impairment; Nystagmus; Obsessive-compulsive behavior; Optic atrophy; Optic nerve coloboma; Phenotypic variability; Phocomelia; Phthisis bulbi; Pneumonia; Premature birth; Proptosis; Proximal placement of thumb; Ptosis; Pyloric stenosis; Radioulnar synostosis; Reduced renal corticomedullary differentiation; Seizures; Self-injurious behavior; Sensorineural hearing impairment; Severe postnatal growth retardation; Short 1st metacarpal; Short foot; Short neck; Short nose; Short stature; Short sternum; Single transverse palmar crease; Sleep disturbance; Small hand; Sporadic; Strabismus; Supernumerary ribs; Synophrys; Thick eyebrow; Thin upper lip vermilion; Thin vermilion border; Thrombocytopenia; Toe syndactyly; Ventricular septal defect; Vesicoureteral reflux; Weak cry; Widely spaced teeth
PORCNXp11.2399.99%gene with protein product300651DHOFAbnormal palmar dermatoglyphics; Abnormality of dental enamel; Abnormality of dental morphology; Abnormality of epiphysis morphology; Abnormality of skin pigmentation; Abnormality of the larynx; Abnormality of the middle ear; Abnormality of the nail; Abnormality of the pinna; Absent fingernail; Absent toenail; Agenesis of corpus callosum; Alopecia; Aniridia; Anophthalmia; Anteriorly placed anus; Arnold-Chiari malformation; Bifid ureter; Brachydactyly; Brittle hair; Broad nasal tip; Camptodactyly of finger; Chorioretinal coloboma; Cleft ala nasi; Cleft palate; Cleft upper lip; Clitoral hypoplasia; Cognitive impairment; Congenital diaphragmatic hernia; Congenital hip dislocation; Corneal opacity; Cryptorchidism; Delayed eruption of teeth; Dental malocclusion; Dermal atrophy; Diastasis recti; Ectopia lentis; Erythema; Facial asymmetry; Finger syndactyly; Foot oligodactyly; Foot polydactyly; Hand oligodactyly; Hand polydactyly; Hearing impairment; Hiatus hernia; Horseshoe kidney; Hydrocephalus; Hydronephrosis; Hypodontia; Hypoplasia of dental enamel; Hypoplasia of the iris; Hypoplastic nipples; Hypoplastic pelvis; Inguinal hernia; Intellectual disability; Intestinal malrotation; Iris coloboma; Joint laxity; Labial hypoplasia; Linear hyperpigmentation; Low-set ears; Lower limb asymmetry; Macule; Microcephaly; Microphthalmia; Midclavicular aplasia; Midclavicular hypoplasia; Mixed hearing impairment; Multicystic kidney dysplasia; Myelomeningocele; Nail dysplasia; Nail dystrophy; Narrow nasal bridge; Nystagmus; Oligodontia; Omphalocele; Open bite; Optic atrophy; Osteopathia striata; Papilloma; Patchy alopecia; Pointed chin; Postaxial hand polydactyly; Reduced number of teeth; Reduced visual acuity; Reticular hyperpigmentation; Rough bone trabeculation; Scoliosis; Short clavicles; Short finger; Short metacarpal; Short metatarsal; Short phalanx of finger; Short ribs; Short stature; Sparse hair; Spina bifida; Spina bifida occulta; Split foot; Split hand; Stenosis of the external auditory canal; Strabismus; Subcutaneous nodule; Supernumerary nipple; Telangiectasia; Telangiectasia of the skin; Thin skin; Toe syndactyly; Umbilical hernia; Upper limb asymmetry; Ureteral duplication; Visual impairment; X-linked dominant inheritanceEctodermal Dysplasia
RECQL48q24.399.97%gene with protein product603780Abnormal heart morphology; Abnormal vertebral morphology; Abnormality of the carpal bones; Abnormality of the kidney; Abnormality of the metacarpal bones; Abnormality of the nail; Absent eyebrow; Absent eyelashes; Absent radius; Absent thumb; Agenesis of corpus callosum; Agenesis of permanent teeth; Alopecia; Anal atresia; Annular pancreas; Anomalous splenoportal venous system; Anteriorly placed anus; Aphalangy of the hands; Aplasia of metacarpal bones; Aplasia/Hypoplasia of the patella; Aplasia/Hypoplasia of the radius; Aplasia/Hypoplasia of the thumb; Autosomal recessive inheritance; Basal cell carcinoma; Bicoronal synostosis; Bifid uvula; Blepharophimosis; Bowing of the long bones; Brachyturricephaly; Brittle hair; Carpal bone aplasia; Carpal synostosis; Cataract; Choanal stenosis; Cleft palate; Concave nasal ridge; Conductive hearing impairment; Coronal craniosynostosis; Cryptorchidism; Cutaneous photosensitivity; Delayed eruption of teeth; Dermal atrophy; Diarrhea; Downslanted palpebral fissures; Epicanthus; Failure to thrive in infancy; Flat forehead; Forearm reduction defects; Frontal bossing; Glaucoma; Growth delay; Hand oligodactyly; Hearing impairment; High palate; High, narrow palate; Hydrocephalus; Hypertelorism; Hypogonadism; Hypoplasia of teeth; Hypoplasia of the radius; Hypoplasia of the ulna; Hypotrichosis; Increased number of teeth; Intellectual disability; Intrauterine growth retardation; Joint dislocation; Juvenile zonular cataracts; Lambdoidal craniosynostosis; Large fontanelles; Limited elbow movement; Limited shoulder movement; Long face; Low-set, posteriorly rotated ears; Malabsorption; Mandibular prognathia; Microcornea; Microdontia; Micrognathia; Microphthalmia; Midface capillary hemangioma; Mottled pigmentation; Myopia; Nail dystrophy; Narrow mouth; Optic atrophy; Osteoporosis; Osteosarcoma; Palmoplantar keratoderma; Patellar hypoplasia; Perineal fistula; Poikiloderma; Polymicrogyria; Premature graying of hair; Prematurely aged appearance; Prominent nasal bridge; Proptosis; Rectovaginal fistula; Rib fusion; Sagittal craniosynostosis; Scoliosis; Seizures; Short chin; Short foot; Short humerus; Short nose; Short palm; Short stature; Short thumb; Skeletal dysplasia; Slender nose; Small hand; Sparse hair; Spina bifida occulta; Squamous cell carcinoma; Stiff interphalangeal joints; Strabismus; Talipes equinovarus; Telangiectasia; Ulnar bowing; Underdeveloped nasal alaeVACTERL Association
SF3B41q21.2100%gene with protein product605593Abnormal nasal morphology; Abnormality of cardiovascular system morphology; Abnormality of pelvic girdle bone morphology; Abnormality of the cervical spine; Absent radius; Absent thumb; Aganglionic megacolon; Aplasia/Hypoplasia of the eyebrow; Aplasia/Hypoplasia of the radius; Aplasia/Hypoplasia of the thumb; Aplasia/Hypoplasia of the ulna; Aqueductal stenosis; Arrhinencephaly; Atresia of the external auditory canal; Autosomal dominant inheritance; Bicornuate uterus; Broad hallux; Cleft palate; Cleft upper lip; Clinodactyly; Conductive hearing impairment; Delayed speech and language development; Downslanted palpebral fissures; Fibular hypoplasia; Foot oligodactyly; Gastroschisis; Hallux valgus; Hand oligodactyly; Hearing impairment; Hip dislocation; Hydrocephalus; Hypoplasia of first ribs; Hypoplasia of the epiglottis; Hypoplasia of the maxilla; Hypoplasia of the radius; Hypoplasia of the zygomatic bone; Joint stiffness; Laryngeal hypoplasia; Limited elbow extension; Low-set ears; Lower eyelid coloboma; Malar flattening; Microcephaly; Micrognathia; Microretrognathia; Microtia; Midface retrusion; Overlapping toe; Polymicrogyria; Posteriorly rotated ears; Preauricular skin tag; Premature birth; Prominent nasal bridge; Ptosis; Radial deviation of finger; Radioulnar synostosis; Respiratory insufficiency; Retrognathia; Scoliosis; Short stature; Short toe; Skeletal dysplasia; Sparse lower eyelashes; Sprengel anomaly; Talipes equinovarus; Tetralogy of Fallot; Toe syndactyly; Triphalangeal thumb; Trismus; Unilateral renal agenesis; Urticaria; Variable expressivity; Velopharyngeal insufficiency; Wide mouth
SMOC114q24.1100%gene with protein product608488Abnormal eyebrow morphology; Abnormal form of the vertebral bodies; Abnormality of the cardiovascular system; Abnormality of the hair; Abnormality of the metacarpal bones; Anophthalmia; Autosomal recessive inheritance; Bilateral single transverse palmar creases; Blepharophimosis; Camptodactyly of 2nd-5th fingers; Cleft palate; Cleft upper lip; Clinodactyly of the 5th finger; Deep philtrum; Depressed nasal bridge; Downslanted palpebral fissures; Failure to thrive; Fibular hypoplasia; Finger syndactyly; Flared nostrils; Foot oligodactyly; Frontal bossing; Fused fourth and fifth metacarpals; Hand oligodactyly; High palate; Hip dislocation; Hypoplasia of the maxilla; Intellectual disability; Intellectual disability, moderate; Intellectual disability, severe; Large earlobe; Low-set ears; Low-set, posteriorly rotated ears; Microphthalmia; Optic atrophy; Postaxial foot polydactyly; Postaxial hand polydactyly; Posteriorly rotated ears; Postnatal growth retardation; Prominent forehead; Retrognathia; Sandal gap; Short nose; Short palpebral fissure; Short stature; Short tibia; Single transverse palmar crease; Synostosis of carpal bones; Talipes equinovarus; Tarsal synostosis; Tibial bowing; Toe syndactyly; True anophthalmia
SMOC114q24.1100%gene with protein product608488Abnormal eyebrow morphology; Abnormal form of the vertebral bodies; Abnormality of the cardiovascular system; Abnormality of the hair; Abnormality of the metacarpal bones; Anophthalmia; Autosomal recessive inheritance; Bilateral single transverse palmar creases; Blepharophimosis; Camptodactyly of 2nd-5th fingers; Cleft palate; Cleft upper lip; Clinodactyly of the 5th finger; Deep philtrum; Depressed nasal bridge; Downslanted palpebral fissures; Failure to thrive; Fibular hypoplasia; Finger syndactyly; Flared nostrils; Foot oligodactyly; Frontal bossing; Fused fourth and fifth metacarpals; Hand oligodactyly; High palate; Hip dislocation; Hypoplasia of the maxilla; Intellectual disability; Intellectual disability, moderate; Intellectual disability, severe; Large earlobe; Low-set ears; Low-set, posteriorly rotated ears; Microphthalmia; Optic atrophy; Postaxial foot polydactyly; Postaxial hand polydactyly; Posteriorly rotated ears; Postnatal growth retardation; Prominent forehead; Retrognathia; Sandal gap; Short nose; Short palpebral fissure; Short stature; Short tibia; Single transverse palmar crease; Synostosis of carpal bones; Talipes equinovarus; Tarsal synostosis; Tibial bowing; Toe syndactyly; True anophthalmia
WNT10B12q13.12100%gene with protein product601906Autosomal dominant inheritance; Autosomal recessive inheritance; Finger syndactyly; Foot oligodactyly; Hand oligodactyly; Hypoplasia of the maxilla; Incomplete penetrance; Microdontia; Micrognathia; Oligodactyly; Oligodontia; Split foot; Split hand; Toe syndactylyEctodermal Dysplasia
WNT7A3p25.1100%gene with protein product601570Abnormal finger flexion creases; Abnormality of tibia morphology; Absent toenail; Amenorrhea; Anonychia; Aplasia of the ulna; Aplasia of the uterus; Aplasia/Hypoplasia involving the carpal bones; Aplasia/Hypoplasia involving the metacarpal bones; Aplasia/Hypoplasia involving the pelvis; Aplasia/Hypoplasia of metatarsal bones; Aplasia/Hypoplasia of the 5th finger; Aplasia/hypoplasia of the femur; Aplasia/Hypoplasia of the fibula; Aplasia/Hypoplasia of the phalanges of the hand; Aplasia/Hypoplasia of the phalanges of the toes; Aplasia/Hypoplasia of the pubic bone; Aplasia/Hypoplasia of the sacrum; Aplasia/Hypoplasia of the tarsal bones; Aplasia/Hypoplasia of the ulna; Aplastic pubic bones; Autosomal recessive inheritance; Carpal bone aplasia; Clinodactyly; Congenital hip dislocation; Congenital pseudoarthrosis of the clavicle; Decreased calvarial ossification; Disproportionate short stature; Ectrodactyly; Elbow ankylosis; Elbow flexion contracture; Epicanthus; Femoral bowing; Fibular aplasia; Foot oligodactyly; Hand oligodactyly; Hemivertebrae; High palate; Humeroradial synostosis; Hypoplasia of the radius; Hypoplastic iliac wing; Hypoplastic nipples; Hypoplastic pelvis; Hypospadias; Intrauterine growth retardation; Long ear; Low-set ears; Micrognathia; Micromelia; Nail dysplasia; Narrow palate; Patellar aplasia; Pectus carinatum; Phocomelia; Pilonidal sinus; Postaxial hand polydactyly; Radial bowing; Short foot; Short neck; Short stature; Split hand; Talipes equinovarus; Toe syndactyly; Ulnar deviation of finger; Wide nasal bridgeDisorders of Sex Development
WNT7A3p25.1100%gene with protein product601570Abnormal finger flexion creases; Abnormality of tibia morphology; Absent toenail; Amenorrhea; Anonychia; Aplasia of the ulna; Aplasia of the uterus; Aplasia/Hypoplasia involving the carpal bones; Aplasia/Hypoplasia involving the metacarpal bones; Aplasia/Hypoplasia involving the pelvis; Aplasia/Hypoplasia of metatarsal bones; Aplasia/Hypoplasia of the 5th finger; Aplasia/hypoplasia of the femur; Aplasia/Hypoplasia of the fibula; Aplasia/Hypoplasia of the phalanges of the hand; Aplasia/Hypoplasia of the phalanges of the toes; Aplasia/Hypoplasia of the pubic bone; Aplasia/Hypoplasia of the sacrum; Aplasia/Hypoplasia of the tarsal bones; Aplasia/Hypoplasia of the ulna; Aplastic pubic bones; Autosomal recessive inheritance; Carpal bone aplasia; Clinodactyly; Congenital hip dislocation; Congenital pseudoarthrosis of the clavicle; Decreased calvarial ossification; Disproportionate short stature; Ectrodactyly; Elbow ankylosis; Elbow flexion contracture; Epicanthus; Femoral bowing; Fibular aplasia; Foot oligodactyly; Hand oligodactyly; Hemivertebrae; High palate; Humeroradial synostosis; Hypoplasia of the radius; Hypoplastic iliac wing; Hypoplastic nipples; Hypoplastic pelvis; Hypospadias; Intrauterine growth retardation; Long ear; Low-set ears; Micrognathia; Micromelia; Nail dysplasia; Narrow palate; Patellar aplasia; Pectus carinatum; Phocomelia; Pilonidal sinus; Postaxial hand polydactyly; Radial bowing; Short foot; Short neck; Short stature; Split hand; Talipes equinovarus; Toe syndactyly; Ulnar deviation of finger; Wide nasal bridgeDisorders of Sex Development
WNT7A3p25.1100%gene with protein product601570Abnormal finger flexion creases; Abnormality of tibia morphology; Absent toenail; Amenorrhea; Anonychia; Aplasia of the ulna; Aplasia of the uterus; Aplasia/Hypoplasia involving the carpal bones; Aplasia/Hypoplasia involving the metacarpal bones; Aplasia/Hypoplasia involving the pelvis; Aplasia/Hypoplasia of metatarsal bones; Aplasia/Hypoplasia of the 5th finger; Aplasia/hypoplasia of the femur; Aplasia/Hypoplasia of the fibula; Aplasia/Hypoplasia of the phalanges of the hand; Aplasia/Hypoplasia of the phalanges of the toes; Aplasia/Hypoplasia of the pubic bone; Aplasia/Hypoplasia of the sacrum; Aplasia/Hypoplasia of the tarsal bones; Aplasia/Hypoplasia of the ulna; Aplastic pubic bones; Autosomal recessive inheritance; Carpal bone aplasia; Clinodactyly; Congenital hip dislocation; Congenital pseudoarthrosis of the clavicle; Decreased calvarial ossification; Disproportionate short stature; Ectrodactyly; Elbow ankylosis; Elbow flexion contracture; Epicanthus; Femoral bowing; Fibular aplasia; Foot oligodactyly; Hand oligodactyly; Hemivertebrae; High palate; Humeroradial synostosis; Hypoplasia of the radius; Hypoplastic iliac wing; Hypoplastic nipples; Hypoplastic pelvis; Hypospadias; Intrauterine growth retardation; Long ear; Low-set ears; Micrognathia; Micromelia; Nail dysplasia; Narrow palate; Patellar aplasia; Pectus carinatum; Phocomelia; Pilonidal sinus; Postaxial hand polydactyly; Radial bowing; Short foot; Short neck; Short stature; Split hand; Talipes equinovarus; Toe syndactyly; Ulnar deviation of finger; Wide nasal bridgeDisorders of Sex Development


The gene coverage data provided by GeneDx represent an estimate based on previous results, but the specific sequencing coverage data for the genes selected may vary from individual to individual, and cannot be predicted exactly. Changes to an approved gene list can only be made by contacting GeneDx directly at 888-729-1206 and asking to speak with a member of our Whole Exome Sequencing Laboratory.


  SUGGESTED CUSTOM SLICES  

Customize below OR enter Suggested Slice ID on printed requisition form
(e.g. 706 XomeDxSlice - Slice ID: CS-Albinism).

Suggested Slice IDSuggested Gene List Name
CS-AlbinismAlbinism
CS-AAAplastic Anemia
CS-AutoImmuneAutoimmune Disorders
CS-BBSBardet-Biedl Syndrome
CS-BMFBone Marrow Failure Syndromes
CS-CVIDCommon Variable Immune Deficiency
CS-CKUTCongenital Kidney and Urinary Tract (CKUT) Anomalies
CS-DSDDisorders of Sex Development
CS-EDEctodermal Dysplasia
CS-FAFanconi Anemia
CS-AnemiaHemolytic Anemia
CS-HeterotaxyHeterotaxy
CS-IBDInflammatory Bowel Disease
CS-MaleInfMale Infertility
CS-WWSMuscular dystropy-dystroglycanopathy (Walker-Warburg)
CS-NephroticNephrotic Syndrome
CS-ObesityObesity
CS-PPKCIPalmoplantar keratoderma plus congenital ichthyosis
CS-Primary ImmunodefPrimary Immunodeficiency
CS-RhabdoRhabdomyolysis
CS-SRTDShort-Rib Thoracic Dysplasia
CS-VACTERLVACTERL Association
CS-WSWaardenburg Syndrome