XomeDxSlice Tool

Now Available - NEW XomeDxSlice Xpanded – Custom slice testing with trio analysis for lists >150 genes.

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SELECTED GENES FOR YOUR SLICE

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Phenotypes
Clubbing of fingers

Select all: Gene symbolChrAvg % covered at 10xLocus TypeNoteOMIMPrevious symbol(s)Phenotype(s)Slice(s)
ABCA316p13.3100%gene with protein product601615ABC3Alveolar proteinosis; Apnea; Autosomal recessive inheritance; Bronchiectasis; Clubbing of fingers; Congenital onset; Cough; Desquamative interstitial pneumonitis; Exertional dyspnea; Failure to thrive; Gastroesophageal reflux; Ground-glass opacification on pulmonary HRCT; Heterogeneous; Honeycomb lung; Pulmonary fibrosis; Rales; Respiratory distress; Respiratory failure; Reticular pattern on pulmonary HRCT; Tachypnea
ATP11A13q34100%gene with protein product605868Bronchiectasis; Clubbing of fingers; Cough; Exertional dyspnea; Gastroesophageal reflux; Ground-glass opacification on pulmonary HRCT; Honeycomb lung; Pulmonary fibrosis; Rales; Reticular pattern on pulmonary HRCT
DPP919p13.3100%gene with protein product608258Bronchiectasis; Clubbing of fingers; Cough; Exertional dyspnea; Gastroesophageal reflux; Ground-glass opacification on pulmonary HRCT; Honeycomb lung; Pulmonary fibrosis; Rales; Reticular pattern on pulmonary HRCT
DSP6p24.3100%gene with protein product125647Abnormality of the cardiovascular system; Abnormality of the hair; Abnormality of the nail; Acantholysis; Alopecia; Alopecia universalis; Anonychia; Aplasia cutis congenita; Autosomal dominant inheritance; Autosomal recessive inheritance; Bronchiectasis; Clubbing of fingers; Congenital bullous ichthyosiform erythroderma; Congestive heart failure; Cough; Dilated cardiomyopathy; Exertional dyspnea; Failure to thrive; Fragile skin; Gastroesophageal reflux; Gingival recession; Ground-glass opacification on pulmonary HRCT; Heterogeneous; Honeycomb lung; Mitten deformity; Nail dysplasia; Nail dystrophy; Natal tooth; Neonatal death; Oral mucosal blisters; Palmoplantar keratoderma; Palmoplantar keratosis with erythema and scale; Parakeratosis; Patchy palmoplantar keratoderma; Phimosis; Pulmonary fibrosis; Rales; Reduced number of teeth; Reticular pattern on pulmonary HRCT; Right ventricular cardiomyopathy; Sandal gap; Skin erosion; Sparse and thin eyebrow; Sparse eyelashes; Sudden cardiac death; Tapered distal phalanges of finger; Ventricular extrasystoles; Ventricular fibrillation; Ventricular tachycardia; Widely spaced toes; Woolly hairEctodermal Dysplasia ; Palmoplantar keratoderma plus congenital ichthyosis
FAM13A4q22.199.97%gene with protein product613299FAM13A1Bronchiectasis; Clubbing of fingers; Cough; Exertional dyspnea; Gastroesophageal reflux; Ground-glass opacification on pulmonary HRCT; Honeycomb lung; Pulmonary fibrosis; Rales; Reticular pattern on pulmonary HRCT
LRBA4q31.399.84%gene with protein product606453CDC4LArthritis; Asthma; Autoimmune hemolytic anemia; Autosomal recessive inheritance; Bronchiectasis; Chronic diarrhea; Chronic lung disease; Clubbing of fingers; Colitis; Conjunctivitis; Failure to thrive; Gastritis; Growth delay; Hypothyroidism; IgA deficiency; IgM deficiency; Immunodeficiency; Lymphadenopathy; Pneumonia; Progressive; Recurrent otitis media; Recurrent sinusitis; ThrombocytopeniaAutoimmune Disorders ; Common Variable Immune Deficiency ; Inflammatory Bowel Disease
MUC5B11p15.598.32%gene with protein product600770MUC5Bronchiectasis; Clubbing of fingers; Cough; Exertional dyspnea; Gastroesophageal reflux; Ground-glass opacification on pulmonary HRCT; Honeycomb lung; Pulmonary fibrosis; Rales; Reticular pattern on pulmonary HRCT
PARN16p13.1299.86%gene with protein product604212Abnormal blistering of the skin; Abnormality of coagulation; Abnormality of female internal genitalia; Abnormality of neutrophils; Abnormality of skin pigmentation; Abnormality of the fingernails; Abnormality of the pharynx; Adult onset; Alopecia; Anemia; Anorectal anomaly; Aplasia/Hypoplasia of the skin; Aplastic/hypoplastic toenail; Autosomal dominant inheritance; Autosomal recessive inheritance; Bone marrow hypocellularity; Bronchiectasis; Carious teeth; Cellular immunodeficiency; Cerebellar hypoplasia; Cerebral cortical atrophy; Clubbing of fingers; Cough; Dermal atrophy; Esophageal stenosis; Excessive wrinkled skin; Exertional dyspnea; Failure to thrive; Gastroesophageal reflux; Generalized hyperpigmentation; Generalized hypopigmentation of hair; Global developmental delay; Ground-glass opacification on pulmonary HRCT; Honeycomb lung; Hyperhidrosis; Hypermelanotic macule; Hypertonia; Hypodontia; Hypopigmented skin patches; Immunodeficiency; Incomplete penetrance; Infantile onset; Intellectual disability; Intrauterine growth retardation; Malabsorption; Microcephaly; Nail dystrophy; Oral leukoplakia; Periodontitis; Premature graying of hair; Pulmonary fibrosis; Rales; Recurrent fractures; Recurrent respiratory infections; Reticular pattern on pulmonary HRCT; Rough bone trabeculation; Short stature; Skin ulcer; Sparse hair; Sparse scalp hair; Taurodontia; Telangiectasia of the skin; Thrombocytopenia; Tracheoesophageal fistula; Urethral stenosis; Variable expressivity; VentriculomegalyAplastic Anemia ; Bone Marrow Failure Syndromes
PSMB86p21.3299.84%gene with protein product177046LMP7Abnormality of the Leydig cells; Abnormally large globe; Adipose tissue loss; Arthralgia; Arthrogryposis multiplex congenita; Autosomal recessive inheritance; Basal ganglia calcification; Bone pain; Camptodactyly of finger; Cardiomegaly; Clubbing of fingers; Clubbing of toes; Congestive heart failure; Conjunctivitis; Elbow flexion contracture; Elevated erythrocyte sedimentation rate; Elevated hepatic transaminases; Episcleritis; Episodic fever; Erythema; Erythema nodosum; Failure to thrive; Finger swelling; Flexion contracture of toe; Hepatomegaly; Hyperhidrosis; Hyperostosis; Hyperpigmentation of the skin; Hypertriglyceridemia; Increased antibody level in blood; Intellectual disability, mild; Joint stiffness; Lipoatrophy; Lipodystrophy; Long fingers; Lymphadenopathy; Macroglossia; Macrotia; Microcytic anemia; Muscle weakness; Osteopenia; Panniculitis; Prominent nose; Skeletal muscle atrophy; Skin rash; Splenomegaly; Subcutaneous nodule; Thick lower lip vermilion
PSMB86p21.3299.84%gene with protein product177046LMP7Abnormality of the Leydig cells; Abnormally large globe; Adipose tissue loss; Arthralgia; Arthrogryposis multiplex congenita; Autosomal recessive inheritance; Basal ganglia calcification; Bone pain; Camptodactyly of finger; Cardiomegaly; Clubbing of fingers; Clubbing of toes; Congestive heart failure; Conjunctivitis; Elbow flexion contracture; Elevated erythrocyte sedimentation rate; Elevated hepatic transaminases; Episcleritis; Episodic fever; Erythema; Erythema nodosum; Failure to thrive; Finger swelling; Flexion contracture of toe; Hepatomegaly; Hyperhidrosis; Hyperostosis; Hyperpigmentation of the skin; Hypertriglyceridemia; Increased antibody level in blood; Intellectual disability, mild; Joint stiffness; Lipoatrophy; Lipodystrophy; Long fingers; Lymphadenopathy; Macroglossia; Macrotia; Microcytic anemia; Muscle weakness; Osteopenia; Panniculitis; Prominent nose; Skeletal muscle atrophy; Skin rash; Splenomegaly; Subcutaneous nodule; Thick lower lip vermilion
PTH1R3p21.3199.98%gene with protein product168468PTHR, PTHR1Abnormal trabecular bone morphology; Abnormality of epiphysis morphology; Abnormality of the acetabulum; Abnormality of the fingertips; Abnormality of the metaphysis; Absence of the sacrum; Accelerated skeletal maturation; Advanced ossification of carpal bones; Advanced tarsal ossification; Anteverted nares; Aplastic clavicles; Arthralgia; Autosomal dominant inheritance; Autosomal recessive inheritance; Bone pain; Bowing of the long bones; Brachycephaly; Broad clavicles; Broad foot; Broad palm; Cataract; Choanal atresia; Choanal stenosis; Clinodactyly of the 5th finger; Clubbing of fingers; Cubitus valgus; Delayed epiphyseal ossification; Depressed nasal bridge; Distal shortening of limbs; Elevated alkaline phosphatase; Epiphyseal dysplasia; Failure of eruption of permanent teeth; Fibular hypoplasia; Flared metaphysis; Generalized osteosclerosis; Hearing impairment; High iliac wings; Hip contracture; Hydrops fetalis; Hypercalcemia; Hypercalciuria; Hyperphosphaturia; Hypertelorism; Hypodontia; Hypoparathyroidism; Hypophosphatemia; Increased bone mineral density; Joint stiffness; Knee flexion contracture; Laryngeal calcification; Lethal skeletal dysplasia; Limited elbow flexion; Limited hip movement; Long philtrum; Low-set ears; Malar flattening; Mesomelia; Metaphyseal chondrodysplasia; Metaphyseal cupping; Metaphyseal irregularity; Micrognathia; Micromelia; Misalignment of teeth; Multiple enchondromatosis; Narrow chest; Narrow pelvis bone; Natal tooth; Neonatal short-limb short stature; Nephrocalcinosis; Osteolysis; Osteopenia; Pathologic fracture; Persistence of primary teeth; Platyspondyly; Polyhydramnios; Premature birth; Prominent supraorbital arches in adult; Proptosis; Protruding tongue; Protuberant abdomen; Pulmonary hypoplasia; Rhizomelia; Severe short stature; Short foot; Short long bone; Short metacarpal; Short nose; Short palm; Short phalanx of finger; Short ribs; Short stature; Short thorax; Short toe; Skeletal dysplasia; Squared iliac bones; Stillbirth; Subcutaneous nodule; Synostosis of joints; Telecanthus; Thick skull base; Thin bony cortex; Visceral angiomatosis; Waddling gaitEctodermal Dysplasia
RTEL120q13.3399.99%gene with protein product608833C20orf41Abnormal blistering of the skin; Abnormality of coagulation; Abnormality of female internal genitalia; Abnormality of neutrophils; Abnormality of the fingernails; Abnormality of the pharynx; Adult onset; Anemia; Anorectal anomaly; Aplasia/Hypoplasia of the skin; Aplastic/hypoplastic toenail; Autosomal dominant inheritance; Autosomal recessive inheritance; Bone marrow hypocellularity; Bronchiectasis; Carious teeth; Cellular immunodeficiency; Cerebellar hypoplasia; Cerebral cortical atrophy; Clubbing of fingers; Cough; Decreased antibody level in blood; Dermal atrophy; Esophageal stenosis; Excessive wrinkled skin; Exertional dyspnea; Failure to thrive; Gastroesophageal reflux; Generalized hyperpigmentation; Generalized hypopigmentation of hair; Global developmental delay; Ground-glass opacification on pulmonary HRCT; Honeycomb lung; Hyperhidrosis; Hypermelanotic macule; Hypertonia; Hypodontia; Hypopigmented skin patches; Immunodeficiency; Incomplete penetrance; Intellectual disability; Intrauterine growth retardation; Leukopenia; Malabsorption; Microcephaly; Nail dystrophy; Oral leukoplakia; Periodontitis; Postnatal growth retardation; Premature graying of hair; Pulmonary fibrosis; Rales; Recurrent fractures; Recurrent respiratory infections; Reticular pattern on pulmonary HRCT; Rough bone trabeculation; Short stature; Skin ulcer; Sparse hair; Sparse scalp hair; Taurodontia; Telangiectasia of the skin; Thrombocytopenia; Tracheoesophageal fistula; Urethral stenosis; Variable expressivity; VentriculomegalyAplastic Anemia ; Bone Marrow Failure Syndromes ; Inflammatory Bowel Disease
SFTPA110q22.3100%gene with protein product178630SFTP1Bronchiectasis; Clubbing of fingers; Cough; Exertional dyspnea; Gastroesophageal reflux; Ground-glass opacification on pulmonary HRCT; Honeycomb lung; Pulmonary fibrosis; Rales; Reticular pattern on pulmonary HRCT
SFTPA210q22.399.97%gene with protein product178642Alveolar cell carcinoma; Autosomal dominant inheritance; Bronchiectasis; Cirrhosis; Clubbing of fingers; Cough; Exertional dyspnea; Gastroesophageal reflux; Ground-glass opacification on pulmonary HRCT; Honeycomb lung; Increased antibody level in blood; Pneumonia; Pulmonary arterial hypertension; Pulmonary fibrosis; Rales; Reticular pattern on pulmonary HRCT
SFTPC8p21.3100%gene with protein product178620SFTP2Alveolar cell carcinoma; Alveolar proteinosis; Autosomal dominant inheritance; Bronchiectasis; Cirrhosis; Clubbing; Clubbing of fingers; Cough; Cyanosis; Exertional dyspnea; Failure to thrive; Gastroesophageal reflux; Ground-glass opacification on pulmonary HRCT; Heterogeneous; Honeycomb lung; Incomplete penetrance; Increased antibody level in blood; Interstitial pneumonitis; Pneumonia; Pulmonary arterial hypertension; Pulmonary fibrosis; Rales; Recurrent respiratory infections; Respiratory distress; Reticular pattern on pulmonary HRCT; Tachypnea; Tubulointerstitial fibrosis
STK1119p13.3100%gene with protein product602216Abdominal pain; Abnormal pigmentation of the oral mucosa; Abnormality of metabolism/homeostasis; Abnormality of the mouth; Abnormality of the ureter; Autosomal dominant inheritance; Biliary tract abnormality; Breast carcinoma; Clubbing of fingers; Cryptorchidism; Gastrointestinal carcinoma; Gastrointestinal hemorrhage; Gonadal dysgenesis; Gynecomastia; Hamartomatous polyposis; Hypermelanotic macule; Increased level of L-fucose in urine; Intestinal bleeding; Intussusception; Iron deficiency anemia; Multiple lentigines; Nasal polyposis; Neoplasm of the pancreas; Ovarian cyst; Precocious puberty with Sertoli cell tumor; Rectal prolapse; Somatic mutation; Sporadic; Teratoma
STN110q24.33100%gene with protein productFormer name = OBFC1613128OBFC1Ataxia; Autosomal recessive inheritance; Bronchiectasis; Clubbing of fingers; Cough; Dystonia; Esophageal varix; Exertional dyspnea; Gastroesophageal reflux; Gastrointestinal hemorrhage; Ground-glass opacification on pulmonary HRCT; Honeycomb lung; Intrauterine growth retardation; Osteopenia; Pancytopenia; Portal hypertension; Premature graying of hair; Pulmonary fibrosis; Rales; Reticular pattern on pulmonary HRCT; Retinal telangiectasia; SpasticityBone Marrow Failure Syndromes
TERC3q26.2100%RNA, miscRNA gene specifically targeted for capture602322Abnormal blistering of the skin; Abnormality of coagulation; Abnormality of female internal genitalia; Abnormality of neutrophils; Abnormality of the fingernails; Abnormality of the pharynx; Alopecia; Anemia; Anorectal anomaly; Aplasia/Hypoplasia of the skin; Aplastic anemia; Aplastic/hypoplastic toenail; Ataxia; Autosomal dominant inheritance; Bone marrow hypocellularity; Bronchiectasis; Carious teeth; Cellular immunodeficiency; Cerebellar hypoplasia; Cirrhosis; Clubbing of fingers; Cough; Dermal atrophy; Esophageal stenosis; Exertional dyspnea; Gastroesophageal reflux; Global developmental delay; Ground-glass opacification on pulmonary HRCT; Honeycomb lung; Hyperhidrosis; Hypermelanotic macule; Hypodontia; Hypopigmented skin patches; Interstitial pneumonitis; Intrauterine growth retardation; Lymphopenia; Malabsorption; Myelodysplasia; Nail dystrophy; Nail pits; Oral leukoplakia; Osteoporosis; Periodontitis; Phenotypic variability; Premature graying of hair; Premature loss of teeth; Pulmonary fibrosis; Rales; Recurrent fractures; Recurrent respiratory infections; Reticular hyperpigmentation; Reticular pattern on pulmonary HRCT; Ridged nail; Rough bone trabeculation; Short stature; Skin ulcer; Sparse hair; Specific learning disability; Squamous cell carcinoma of the skin; Taurodontia; Telangiectasia of the skin; Thrombocytopenia; Tracheoesophageal fistula; Urethral stenosisAplastic Anemia ; Bone Marrow Failure Syndromes ; Palmoplantar keratoderma plus congenital ichthyosis
TERT5p15.33100%gene with protein product187270Abnormal blistering of the skin; Abnormality of coagulation; Abnormality of female internal genitalia; Abnormality of neutrophils; Abnormality of the fingernails; Abnormality of the hair; Abnormality of the lymphatic system; Abnormality of the pharynx; Alopecia; Alveolar cell carcinoma; Anemia; Anorectal anomaly; Aplasia/Hypoplasia of the skin; Aplastic anemia; Aplastic/hypoplastic toenail; Ataxia; Autosomal dominant inheritance; Bone marrow hypocellularity; Bronchiectasis; Carious teeth; Cellular immunodeficiency; Cerebellar hypoplasia; Cerebral cortical atrophy; Cirrhosis; Clubbing of fingers; Cough; Dermal atrophy; Dry skin; Esophageal stenosis; Excessive wrinkled skin; Exertional dyspnea; Failure to thrive; Freckling; Gastroesophageal reflux; Generalized hyperpigmentation; Generalized hypopigmentation of hair; Global developmental delay; Ground-glass opacification on pulmonary HRCT; Honeycomb lung; Hyperhidrosis; Hypermelanotic macule; Hypertonia; Hypodontia; Hypopigmented skin patches; Immunodeficiency; Increased antibody level in blood; Intellectual disability; Interstitial pneumonitis; Intrauterine growth retardation; Lymphopenia; Malabsorption; Melanoma; Microcephaly; Myelodysplasia; Nail dystrophy; Nail pits; Nevus; Oral leukoplakia; Osteoporosis; Periodontitis; Phenotypic variability; Pneumonia; Premature graying of hair; Premature loss of teeth; Pulmonary arterial hypertension; Pulmonary fibrosis; Rales; Recurrent fractures; Recurrent respiratory infections; Reticular hyperpigmentation; Reticular pattern on pulmonary HRCT; Ridged nail; Rough bone trabeculation; Short stature; Skin ulcer; Sparse hair; Sparse scalp hair; Specific learning disability; Squamous cell carcinoma of the skin; Taurodontia; Telangiectasia of the skin; Thrombocytopenia; Tracheoesophageal fistula; Urethral stenosis; VentriculomegalyAplastic Anemia ; Bone Marrow Failure Syndromes ; Palmoplantar keratoderma plus congenital ichthyosis


The gene coverage data provided by GeneDx represent an estimate based on previous results, but the specific sequencing coverage data for the genes selected may vary from individual to individual, and cannot be predicted exactly. Changes to an approved gene list can only be made by contacting GeneDx directly at 888-729-1206 and asking to speak with a member of our Whole Exome Sequencing Laboratory.


  SUGGESTED CUSTOM SLICES  

Customize below OR enter Suggested Slice ID on printed requisition form
(e.g. 706 XomeDxSlice - Slice ID: CS-Albinism).

Suggested Slice IDSuggested Gene List Name
CS-AlbinismAlbinism
CS-AAAplastic Anemia
CS-AutoImmuneAutoimmune Disorders
CS-BBSBardet-Biedl Syndrome
CS-BMFBone Marrow Failure Syndromes
CS-CVIDCommon Variable Immune Deficiency
CS-CKUTCongenital Kidney and Urinary Tract (CKUT) Anomalies
CS-DSDDisorders of Sex Development
CS-EDEctodermal Dysplasia
CS-FAFanconi Anemia
CS-AnemiaHemolytic Anemia
CS-HeterotaxyHeterotaxy
CS-IBDInflammatory Bowel Disease
CS-MaleInfMale Infertility
CS-WWSMuscular dystropy-dystroglycanopathy (Walker-Warburg)
CS-NephroticNephrotic Syndrome
CS-ObesityObesity
CS-PPKCIPalmoplantar keratoderma plus congenital ichthyosis
CS-Primary ImmunodefPrimary Immunodeficiency
CS-RhabdoRhabdomyolysis
CS-SRTDShort-Rib Thoracic Dysplasia
CS-VACTERLVACTERL Association
CS-WSWaardenburg Syndrome