XomeDxSlice Tool

Now Available - NEW XomeDxSlice Xpanded – Custom slice testing with trio analysis for lists >150 genes.

INSTRUCTIONS (AND TIPS)

ENTER GENES BELOW AND CLICK "ADD GENES TO SLICE"

If cutting and pasting from another document, please be sure to list EITHER one gene symbol per line OR enter a comma-separated list.


OR

SEARCH BY GENE SYMBOL OR PHENOTYPE (HPO TERM)

You may also use this search to review average exome sequencing coverage by entering the gene symbol below.

SELECTED GENES FOR YOUR SLICE

What do you want to do?

Place an e-order of this Slice on a specific patient through the GeneDx Portal  
Obtain a Slice ID to order testing with a printed requisition form  
Only email the gene list to myself and/or others at this time  


 
Phenotypes
Bone spicule pigmentation of the retina

Select all: Gene symbolChrAvg % covered at 10xLocus TypeNoteOMIMPrevious symbol(s)Phenotype(s)Slice(s)
ABCA41p22.1100%gene with protein product601691STGD1, ABCR, RP19, STGDAbnormal choroid morphology; Abnormal electroretinogram; Abnormal foveal morphology; Abnormality of color vision; Abnormality of macular pigmentation; Abnormality of retinal pigmentation; Abnormality of the retinal vasculature; Abnormality of the testis; Abnormality of visual evoked potentials; Anteverted nares; Aplasia/Hypoplasia of the macula; Attenuation of retinal blood vessels; Atypical scarring of skin; Autosomal recessive inheritance; Blindness; Bone spicule pigmentation of the retina; Cataract; Central scotoma; Conductive hearing impairment; Cone/cone-rod dystrophy; Constriction of peripheral visual field; Glaucoma; Hyperinsulinemia; Hypogonadism; Hypoplasia of penis; Intellectual disability; Keratoconus; Macular degeneration; Nyctalopia; Nystagmus; Obesity; Ophthalmoplegia; Optic atrophy; Optic disc pallor; Paroxysmal involuntary eye movements; Photophobia; Progressive night blindness; Reduced visual acuity; Retinal pigment epithelial atrophy; Retinal pigment epithelial mottling; Retinal thinning; Retinitis pigmentosa inversa; Rod-cone dystrophy; Sensorineural hearing impairment; Visual impairment; Visual loss; Wide nasal bridge; Yellow/white lesions of the macula
C2ORF712p23.2100%gene with protein product613425Abnormal electroretinogram; Abnormality of retinal pigmentation; Abnormality of the retinal vasculature; Abnormality of the testis; Anteverted nares; Attenuation of retinal blood vessels; Atypical scarring of skin; Autosomal recessive inheritance; Blindness; Bone spicule pigmentation of the retina; Cataract; Conductive hearing impairment; Fundus atrophy; Glaucoma; Hyperinsulinemia; Hypogonadism; Hypoplasia of penis; Intellectual disability; Keratoconus; Nyctalopia; Nystagmus; Obesity; Ophthalmoplegia; Optic atrophy; Photophobia; Progressive night blindness; Rod-cone dystrophy; Sensorineural hearing impairment; Visual impairment; Wide nasal bridge
CLRN13q25.1100%gene with protein product606397USH3, USH3A, RP61Abnormal cochlea morphology; Abnormal electroretinogram; Abnormality of retinal pigmentation; Abnormality of the retinal vasculature; Abnormality of the testis; Anteverted nares; Astigmatism; Ataxia; Attenuation of retinal blood vessels; Atypical scarring of skin; Autosomal recessive inheritance; Blindness; Bone spicule pigmentation of the retina; Cataract; Conductive hearing impairment; Constriction of peripheral visual field; Glaucoma; Hemianopia; High hypermetropia; Hyperinsulinemia; Hypogonadism; Hypoplasia of penis; Intellectual disability; Iris hypopigmentation; Keratoconus; Nyctalopia; Nystagmus; Obesity; Ophthalmoplegia; Optic atrophy; Photophobia; Progressive night blindness; Reduced visual acuity; Rod-cone dystrophy; Scotoma; Sensorineural hearing impairment; Undetectable light- and dark-adapted electroretinogram; Vestibular dysfunction; Vestibular hypofunction; Visual field defect; Visual impairment; Visual loss; Wide nasal bridge
CNGB116q21100%gene with protein product600724CNCG2, CNCG3LAbnormal electroretinogram; Abnormality of retinal pigmentation; Abnormality of the retinal vasculature; Abnormality of the testis; Anteverted nares; Atypical scarring of skin; Autosomal recessive inheritance; Blindness; Bone spicule pigmentation of the retina; Cataract; Conductive hearing impairment; Glaucoma; Hyperinsulinemia; Hypogonadism; Hypoplasia of penis; Intellectual disability; Keratoconus; Nyctalopia; Nystagmus; Obesity; Ophthalmoplegia; Optic atrophy; Peripheral visual field loss; Photophobia; Progressive night blindness; Rod-cone dystrophy; Sensorineural hearing impairment; Wide nasal bridge
CRB11q31.3100%gene with protein product604210RP12Abnormal electroretinogram; Abnormality of neuronal migration; Abnormality of retinal pigmentation; Abnormality of the optic disc; Abnormality of the retinal vasculature; Abnormality of the testis; Anteverted nares; Aplasia/Hypoplasia of the cerebellar vermis; Atypical scarring of skin; Autosomal recessive inheritance; Blindness; Bone spicule pigmentation of the retina; Cataract; Conductive hearing impairment; Encephalocele; Esotropia; Glaucoma; Hemiplegia/hemiparesis; High hypermetropia; Hyperinsulinemia; Hypermetropia; Hypogonadism; Hypoplasia of penis; Intellectual disability; Keratoconus; Muscular hypotonia; Nystagmus; Obesity; Ophthalmoplegia; Optic atrophy; Paravenous chorioretinal atrophy; Pendular nystagmus; Photophobia; Progressive night blindness; Rod-cone dystrophy; Seizures; Sensorineural hearing impairment; Severe visual impairment; Undetectable electroretinogram; Visual impairment; Vitreoretinal degeneration; Wide nasal bridge
EYS6q1299.96%gene with protein product612424C6orf180, EGFL11, RP25, EGFL10, C6orf178, C6orf179Abnormal electroretinogram; Abnormality of retinal pigmentation; Abnormality of the retinal vasculature; Abnormality of the testis; Anteverted nares; Attenuation of retinal blood vessels; Atypical scarring of skin; Autosomal recessive inheritance; Blindness; Bone spicule pigmentation of the retina; Cataract; Conductive hearing impairment; Constriction of peripheral visual field; Glaucoma; Hyperinsulinemia; Hypogonadism; Hypoplasia of penis; Intellectual disability; Keratoconus; Nyctalopia; Nystagmus; Obesity; Ophthalmoplegia; Optic atrophy; Photophobia; Progressive night blindness; Rod-cone dystrophy; Sensorineural hearing impairment; Undetectable electroretinogram; Wide nasal bridge
FAM161A2p1599.98%gene with protein product613596RP28Abnormal electroretinogram; Abnormality of retinal pigmentation; Abnormality of the retinal vasculature; Abnormality of the testis; Anteverted nares; Atypical scarring of skin; Autosomal recessive inheritance; Blindness; Bone spicule pigmentation of the retina; Cataract; Conductive hearing impairment; Constriction of peripheral visual field; Glaucoma; Hyperinsulinemia; Hypogonadism; Hypoplasia of penis; Intellectual disability; Keratoconus; Nyctalopia; Nystagmus; Obesity; Ophthalmoplegia; Optic atrophy; Optic disc pallor; Photophobia; Progressive night blindness; Rod-cone dystrophy; Sensorineural hearing impairment; Wide nasal bridge
FLVCR11q32.399.99%gene with protein product609144AXPC1Achalasia; Areflexia; Autosomal recessive inheritance; Blindness; Bone spicule pigmentation of the retina; Broad-based gait; Camptodactyly; Childhood onset; Decreased sensory nerve conduction velocity; Distal muscle weakness; Impaired vibration sensation in the lower limbs; Joint contracture of the hand; Nyctalopia; Optic atrophy; Positive Romberg sign; Recurrent urinary tract infections; Ring scotoma; Rod-cone dystrophy; Scoliosis; Scotoma; Sensory ataxia; Skeletal muscle atrophy; Slow progression; Undetectable electroretinogram; Urinary incontinence
FSCN217q25.3100%gene with protein product607643Abnormal electroretinogram; Abnormality of retinal pigmentation; Abnormality of the retinal vasculature; Abnormality of the testis; Anteverted nares; Attenuation of retinal blood vessels; Atypical scarring of skin; Autosomal dominant inheritance; Blindness; Bone spicule pigmentation of the retina; Cataract; Chorioretinal atrophy; Conductive hearing impairment; Glaucoma; Hyperinsulinemia; Hypogonadism; Hypoplasia of penis; Intellectual disability; Keratoconus; Nyctalopia; Nystagmus; Obesity; Ophthalmoplegia; Optic atrophy; Photophobia; Progressive night blindness; Rod-cone dystrophy; Sensorineural hearing impairment; Visual impairment; Wide nasal bridge
IMPDH17q32.1100%gene with protein product146690RP10Abnormal electroretinogram; Abnormality of neuronal migration; Abnormality of retinal pigmentation; Abnormality of the optic disc; Abnormality of the retinal vasculature; Abnormality of the testis; Anteverted nares; Aplasia/Hypoplasia of the cerebellar vermis; Atypical scarring of skin; Autosomal dominant inheritance; Blindness; Bone spicule pigmentation of the retina; Cataract; Conductive hearing impairment; Constriction of peripheral visual field; Encephalocele; Glaucoma; Hemiplegia/hemiparesis; Hyperinsulinemia; Hypogonadism; Hypoplasia of penis; Infantile onset; Intellectual disability; Keratoconus; Muscular hypotonia; Nyctalopia; Nystagmus; Obesity; Ophthalmoplegia; Optic atrophy; Photophobia; Progressive night blindness; Rod-cone dystrophy; Seizures; Sensorineural hearing impairment; Severe visual impairment; Undetectable light- and dark-adapted electroretinogram; Visual impairment; Wide nasal bridge
MFRP11q23.3100%gene with protein product606227Abnormal choroid morphology; Abnormal foveal morphology; Abnormal light- and dark-adapted electroretinogram; Abnormal sclera morphology; Abnormality of skin pigmentation; Autosomal recessive inheritance; Bone spicule pigmentation of the retina; Drusen; Foveoschisis; Glaucoma; High hypermetropia; Hypermetropia; Microphthalmia; Nyctalopia; Optic disc drusen; Reduced visual acuity; Retinal pigment epithelial atrophy; Rod-cone dystrophy; Scleral thickening; Strabismus; Visual impairment
PRCD17q25.199.86%gene with protein product610598Abnormal electroretinogram; Abnormality of retinal pigmentation; Abnormality of the retinal vasculature; Abnormality of the testis; Anteverted nares; Attenuation of retinal blood vessels; Atypical scarring of skin; Autosomal recessive inheritance; Blindness; Bone spicule pigmentation of the retina; Cataract; Conductive hearing impairment; Glaucoma; Hyperinsulinemia; Hypogonadism; Hypoplasia of penis; Intellectual disability; Keratoconus; Macular degeneration; Nystagmus; Obesity; Ophthalmoplegia; Optic atrophy; Optic disc pallor; Photophobia; Progressive night blindness; Rod-cone dystrophy; Sensorineural hearing impairment; Undetectable electroretinogram; Wide nasal bridge
RHO3q22.1100%gene with protein product180380RP4Abnormal electroretinogram; Abnormality of macular pigmentation; Abnormality of retinal pigmentation; Abnormality of the retinal vasculature; Abnormality of the testis; Anteverted nares; Atypical scarring of skin; Autosomal dominant inheritance; Autosomal recessive inheritance; Blindness; Bone spicule pigmentation of the retina; Cataract; Conductive hearing impairment; Congenital stationary night blindness; Decreased light- and dark-adapted electroretinogram amplitude; Fundus albipunctatus; Glaucoma; High myopia; Hyperinsulinemia; Hypogonadism; Hypoplasia of penis; Intellectual disability; Keratoconus; Nyctalopia; Nystagmus; Obesity; Ophthalmoplegia; Optic atrophy; Optic disc hypoplasia; Photophobia; Pigmentary retinopathy; Progressive night blindness; Reduced visual acuity; Retinal flecks; Rod-cone dystrophy; Sensorineural hearing impairment; Visual field defect; Wide nasal bridge
RP18q11.23-q12.100%gene with protein product603937Abnormal electroretinogram; Abnormality of retinal pigmentation; Abnormality of the retinal vasculature; Abnormality of the testis; Anteverted nares; Atypical scarring of skin; Autosomal dominant inheritance; Autosomal recessive inheritance; Blindness; Bone spicule pigmentation of the retina; Cataract; Conductive hearing impairment; Constriction of peripheral visual field; Glaucoma; Heterogeneous; Hyperinsulinemia; Hypogonadism; Hypoplasia of penis; Intellectual disability; Keratoconus; Myopia; Nyctalopia; Nystagmus; Obesity; Ophthalmoplegia; Optic atrophy; Photophobia; Progressive night blindness; Rod-cone dystrophy; Sensorineural hearing impairment; Undetectable light- and dark-adapted electroretinogram; Wide nasal bridgeAlbinism ; Autoimmune Disorders ; Palmoplantar keratoderma plus congenital ichthyosis
RP97p14.398.3%gene with protein product607331Abnormal electroretinogram; Abnormality of retinal pigmentation; Abnormality of the retinal vasculature; Abnormality of the testis; Anteverted nares; Atypical scarring of skin; Autosomal dominant inheritance; Blindness; Bone spicule pigmentation of the retina; Cataract; Conductive hearing impairment; Constriction of peripheral visual field; Glaucoma; Hyperinsulinemia; Hypogonadism; Hypoplasia of penis; Intellectual disability; Keratoconus; Nyctalopia; Nystagmus; Obesity; Ophthalmoplegia; Optic atrophy; Photophobia; Progressive night blindness; Rod-cone dystrophy; Sensorineural hearing impairment; Undetectable light- and dark-adapted electroretinogram; Wide nasal bridge
SNRNP2002q11.2100%gene with protein product601664ASCC3L1, RP33Abnormal electroretinogram; Abnormality of retinal pigmentation; Abnormality of the retinal vasculature; Abnormality of the testis; Anteverted nares; Attenuation of retinal blood vessels; Atypical scarring of skin; Autosomal dominant inheritance; Blindness; Bone spicule pigmentation of the retina; Cataract; Conductive hearing impairment; Glaucoma; Hyperinsulinemia; Hypogonadism; Hypoplasia of penis; Intellectual disability; Keratoconus; Nyctalopia; Nystagmus; Obesity; Ophthalmoplegia; Optic atrophy; Optic disc pallor; Photophobia; Progressive night blindness; Retinal pigment epithelial atrophy; Rod-cone dystrophy; Sensorineural hearing impairment; Visual impairment; Wide nasal bridge
TTC814q31.3100%gene with protein product608132Abnormal electroretinogram; Abnormal light- and dark-adapted electroretinogram; Abnormality of retinal pigmentation; Abnormality of the retinal vasculature; Abnormality of the testis; Anteverted nares; Attenuation of retinal blood vessels; Atypical scarring of skin; Autosomal recessive inheritance; Blindness; Bone spicule pigmentation of the retina; Brachycephaly; Cataract; Cognitive impairment; Conductive hearing impairment; Glaucoma; Global developmental delay; High myopia; Hyperinsulinemia; Hypertension; Hypogonadism; Hypoplasia of penis; Hypoplasia of the ovary; Hypospadias; Intellectual disability; Keratoconus; Macular degeneration; Multicystic kidney dysplasia; Nyctalopia; Nystagmus; Obesity; Ophthalmoplegia; Optic atrophy; Photophobia; Pigmentary retinopathy; Polydactyly; Postaxial hand polydactyly; Progressive night blindness; Reduced visual acuity; Rod-cone dystrophy; Sensorineural hearing impairment; Short stature; Visual impairment; Wide nasal bridgeBardet-Biedl Syndrome ; Disorders of Sex Development; Heterotaxy ; Obesity
USH2A1q41100%gene with protein product608400USH2Abnormal electroretinogram; Abnormality of retinal pigmentation; Abnormality of the retinal vasculature; Abnormality of the testis; Anteverted nares; Attenuation of retinal blood vessels; Atypical scarring of skin; Autosomal recessive inheritance; Blindness; Bone spicule pigmentation of the retina; Cataract; Conductive hearing impairment; Congenital sensorineural hearing impairment; Glaucoma; Hemianopia; Hyperinsulinemia; Hypogonadism; Hypoplasia of penis; Intellectual disability; Iris hypopigmentation; Keratoconus; Myopia; Nyctalopia; Nystagmus; Obesity; Ophthalmoplegia; Optic atrophy; Photophobia; Progressive night blindness; Rod-cone dystrophy; Scotoma; Sensorineural hearing impairment; Visual field defect; Visual impairment; Visual loss; Wide nasal bridge
ZNF5132p23.399.97%gene with protein product613598Abnormal electroretinogram; Abnormal light- and dark-adapted electroretinogram; Abnormality of retinal pigmentation; Abnormality of the retinal vasculature; Abnormality of the testis; Anteverted nares; Attenuation of retinal blood vessels; Atypical scarring of skin; Autosomal recessive inheritance; Blindness; Bone spicule pigmentation of the retina; Cataract; Conductive hearing impairment; Glaucoma; Hyperinsulinemia; Hypogonadism; Hypoplasia of penis; Intellectual disability; Keratoconus; Nyctalopia; Nystagmus; Obesity; Ophthalmoplegia; Optic atrophy; Optic disc pallor; Peripheral visual field loss; Photophobia; Progressive night blindness; Rod-cone dystrophy; Sensorineural hearing impairment; Severe visual impairment; Wide nasal bridge


The gene coverage data provided by GeneDx represent an estimate based on previous results, but the specific sequencing coverage data for the genes selected may vary from individual to individual, and cannot be predicted exactly. Changes to an approved gene list can only be made by contacting GeneDx directly at 888-729-1206 and asking to speak with a member of our Whole Exome Sequencing Laboratory.


  SUGGESTED CUSTOM SLICES  

Customize below OR enter Suggested Slice ID on printed requisition form
(e.g. 706 XomeDxSlice - Slice ID: CS-Albinism).

Suggested Slice IDSuggested Gene List Name
CS-AlbinismAlbinism
CS-AAAplastic Anemia
CS-AutoImmuneAutoimmune Disorders
CS-BBSBardet-Biedl Syndrome
CS-BMFBone Marrow Failure Syndromes
CS-CVIDCommon Variable Immune Deficiency
CS-CKUTCongenital Kidney and Urinary Tract (CKUT) Anomalies
CS-DSDDisorders of Sex Development
CS-EDEctodermal Dysplasia
CS-FAFanconi Anemia
CS-AnemiaHemolytic Anemia
CS-HeterotaxyHeterotaxy
CS-IBDInflammatory Bowel Disease
CS-MaleInfMale Infertility
CS-WWSMuscular dystropy-dystroglycanopathy (Walker-Warburg)
CS-NephroticNephrotic Syndrome
CS-ObesityObesity
CS-PPKCIPalmoplantar keratoderma plus congenital ichthyosis
CS-Primary ImmunodefPrimary Immunodeficiency
CS-RhabdoRhabdomyolysis
CS-SRTDShort-Rib Thoracic Dysplasia
CS-VACTERLVACTERL Association
CS-WSWaardenburg Syndrome