XomeDxSlice Tool

Now Available - NEW XomeDxSlice Xpanded – Custom slice testing with trio analysis for lists >150 genes.

INSTRUCTIONS (AND TIPS)

ENTER GENES BELOW AND CLICK "ADD GENES TO SLICE"

If cutting and pasting from another document, please be sure to list EITHER one gene symbol per line OR enter a comma-separated list.


OR

SEARCH BY GENE SYMBOL OR PHENOTYPE (HPO TERM)

You may also use this search to review average exome sequencing coverage by entering the gene symbol below.

SELECTED GENES FOR YOUR SLICE

What do you want to do?

Place an e-order of this Slice on a specific patient through the GeneDx Portal  
Obtain a Slice ID to order testing with a printed requisition form  
Only email the gene list to myself and/or others at this time  


 
Phenotypes
Atelectasis

Select all: Gene symbolChrAvg % covered at 10xLocus TypeNoteOMIMPrevious symbol(s)Phenotype(s)Slice(s)
CCDC11419q13.33100%gene with protein product615038Absent outer dynein arms; Atelectasis; Autosomal recessive inheritance; Bronchiectasis; Ciliary dyskinesia; Cough; Recurrent otitis media; Recurrent pneumonia; Recurrent respiratory infections; Recurrent sinusitis; Respiratory insufficiency due to defective ciliary clearanceHeterotaxy
CCNO5q11.2100%gene with protein product607752CCNUAtelectasis; Autosomal recessive inheritance; Bronchiectasis; Ciliary dyskinesia; Progressive; Recurrent respiratory infectionsHeterotaxy
DRC12p23.3100%gene with protein productformer name = CCDC164 or C2ORF39615288C2orf39, CCDC164Atelectasis; Autosomal recessive inheritance; Bronchiectasis; Chronic sinusitis; Ciliary dyskinesia; Recurrent otitis media; Recurrent respiratory infections; SinusitisHeterotaxy
EFEMP211q13.1100%gene with protein product604633Abnormality of the pinna; Aortic aneurysm; Arachnodactyly; Arterial fibromuscular dysplasia; Arterial stenosis; Arterial tortuosity; Atelectasis; Autosomal recessive inheritance; Bladder diverticulum; Bulbous nose; Congenital diaphragmatic hernia; Cutis laxa; Delayed cranial suture closure; Downslanted palpebral fissures; Emphysema; Full cheeks; Generalized arterial tortuosity; Generalized hypotonia; High palate; Hypertelorism; Ileus; Inguinal hernia; Joint hyperflexibility; Joint hypermobility; Low-set ears; Microcephaly; Micrognathia; Narrow palpebral fissure; Pectus excavatum; Premature skin wrinkling; Prominence of the premaxilla; Prominent forehead; Proptosis; Ptosis; Pulmonary artery aneurysm; Pulmonary artery dilatation; Pulmonary insufficiency; Recurrent urinary tract infections; Redundant skin; Renal diverticulum; Soft skin
FBLN514q32.1299.96%gene with protein product604580Abnormality of the face; Aortic aneurysm; Aortic root aneurysm; Arachnodactyly; Arterial fibromuscular dysplasia; Arterial stenosis; Atelectasis; Autosomal dominant inheritance; Autosomal recessive inheritance; Bladder diverticulum; Bowel diverticulosis; Choroidal neovascularization; Congenital diaphragmatic hernia; Cutis laxa; Delayed cranial suture closure; Distal sensory impairment; Drusen; Emphysema; Full cheeks; Heterogeneous; Hypertelorism; Ileus; Inguinal hernia; Joint hyperflexibility; Joint laxity; Microcephaly; Mitral regurgitation; Oligohydramnios; Overgrowth; Pectus excavatum; Pes cavus; Premature skin wrinkling; Ptosis; Recurrent respiratory infections; Recurrent urinary tract infections; Redundant skin; Renal diverticulum; Scoliosis; Supravalvular aortic stenosis; Umbilical hernia; Vascular tortuosity
GAS816q24.3100%gene with protein product605178GAS11Atelectasis; Autosomal recessive inheritance; Bronchiectasis; Chronic rhinitis; Ciliary dyskinesia; Conductive hearing impairment; Cough; Recurrent bronchitis; Recurrent otitis media; Recurrent pneumonia; Recurrent respiratory infectionsHeterotaxy
PAX32q36.1100%gene with protein product606597WS1Abnormality of vision; Aganglionic megacolon; Alveolar rhabdomyosarcoma; Aplasia of the vagina; Aplasia/Hypoplasia involving the nose; Atelectasis; Autosomal dominant contiguous gene syndrome; Autosomal dominant inheritance; Autosomal recessive inheritance; Blepharophimosis; Blue irides; Brachydactyly; Camptodactyly of finger; Carpal synostosis; Clinodactyly; Congenital sensorineural hearing impairment; Cutaneous finger syndactyly; Depressed nasal bridge; Depressed nasal ridge; Downslanted palpebral fissures; Flat face; Hearing impairment; Heterochromia iridis; Hypertelorism; Hypopigmentation of the fundus; Hypopigmented skin patches; Hypoplasia of the maxilla; Hypoplastic iris stroma; Intellectual disability; Joint stiffness; Lacrimal duct atresia; Lacrimation abnormality; Malar flattening; Mandibular prognathia; Microcephaly; Narrow face; Narrow mouth; Narrow nasal bridge; Oral cleft; Partial albinism; Premature graying of hair; Prominent nasal bridge; Scapular winging; Sensorineural hearing impairment; Short nose; Smooth philtrum; Spastic paraplegia; Sprengel anomaly; Supernumerary ribs; Supernumerary vertebrae; Synophrys; Synostosis of carpal bones; Telecanthus; Tented upper lip vermilion; Thick eyebrow; Ulnar deviation of finger; Ulnar deviation of the hand; Ulnar deviation of the wrist; Underdeveloped nasal alae; Variable expressivity; White eyebrow; White eyelashes; White forelock; White hair; Wide nasal bridgeWaardenburg Syndrome
RPGRXp11.499.06%gene with protein productDue to sequence complexity, sensitivity to variants in the ORF15 region may be limited.312610CRD, RP3, RP15, COD1Abnormal electroretinogram; Abnormality of color vision; Abnormality of metabolism/homeostasis; Abnormality of retinal pigmentation; Abnormality of the retinal vasculature; Abnormality of the testis; Anteverted nares; Atelectasis; Atypical scarring of skin; Blindness; Cataract; Chronic sinusitis; Conductive hearing impairment; Cone dysfunction syndrome; Cone/cone-rod dystrophy; Dyschromatopsia; Exotropia; Glaucoma; High-frequency hearing impairment; Hyperinsulinemia; Hypermetropia; Hypogonadism; Hypoplasia of penis; Intellectual disability; Keratoconus; Macular degeneration; Macular scar; Myopia; Nyctalopia; Nystagmus; Obesity; Ophthalmoplegia; Optic atrophy; Otitis media; Pendular nystagmus; Photophobia; Progressive night blindness; Recurrent bronchitis; Recurrent Haemophilus influenzae infections; Recurrent respiratory infections; Reduced visual acuity; Rod-cone dystrophy; Sensorineural hearing impairment; Visual impairment; Wide nasal bridge; X-linked inheritance; X-linked recessive inheritanceHeterotaxy
STAT317q21.2100%gene with protein product102582Abnormal heart morphology; Abnormality of the hair; Arthrogryposis multiplex congenita; Atelectasis; Autoimmune hemolytic anemia; Autoimmune thrombocytopenia; Autoimmunity; Autosomal dominant inheritance; Bilateral ptosis; Celiac disease; Chronic otitis media; Cleft palate; Coarse facial features; Contractures of the joints of the lower limbs; Cough; Decreased antibody level in blood; Deeply set eye; Dehydration; Delayed eruption of teeth; Downturned corners of mouth; Dystrophic fingernails; Eczema; Eczematoid dermatitis; Eosinophilia; Failure to thrive; Frontal bossing; Generalized abnormality of skin; Generalized myoclonic seizures; Generalized tonic-clonic seizures; Gingivitis; Global developmental delay; Glycosuria; High palate; Hyperglycemia; Hypertelorism; Hypovolemia; Increased IgE level; Infantile onset; Intrauterine growth retardation; Joint hyperflexibility; Joint hypermobility; Ketonuria; Microalbuminuria; Motor delay; Neonatal insulin-dependent diabetes mellitus; Osteopenia; Papule; Paronychia; Persistence of primary teeth; Prominent forehead; Prominent metopic ridge; Pruritus; Recurrent fractures; Recurrent fungal infections; Recurrent respiratory infections; Recurrent sinopulmonary infections; Recurrent Staphylococcus aureus infections; Reduced pancreatic beta cells; Retinopathy; Scoliosis; Short stature; Skin rash; Skin ulcer; Weight loss; Wide nasal bridge; Wide noseAutoimmune Disorders ; Common Variable Immune Deficiency ; Inflammatory Bowel Disease ; Primary Immunodeficiency
TSC19q34100%gene with protein product605284TSCAbdominal pain; Abnormality of female internal genitalia; Abnormality of the respiratory system; Achromatic retinal patches; Adenoma sebaceum; Adult onset; Angiofibromas; Astrocytoma; Astrocytosis; Atelectasis; Attention deficit hyperactivity disorder; Autism; Autosomal dominant inheritance; Behavioral abnormality; Cafe-au-lait spot; Cardiac rhabdomyoma; Cerebral calcification; Chest pain; Chordoma; Chylothorax; Cognitive impairment; Confetti-like hypopigmented macules; Cortical dysplasia; Cortical tubers; Cough; Dental enamel pits; Dyspnea; EEG abnormality; Emphysema; Ependymoma; Focal seizures with impairment of consciousness or awareness; Focal white matter lesions; Gingival fibromatosis; Global developmental delay; Hematuria; Hemiparesis; Heterogeneous; Hypomelanotic macule; Hypopigmented skin patches; Hypothyroidism; Infantile onset; Infantile spasms; Intellectual disability; Lymphadenopathy; Multiple cafe-au-lait spots; Nevus flammeus; Optic atrophy; Optic nerve glioma; Papule; Phenotypic variability; Pneumothorax; Precocious puberty; Premature chromatid separation; Projection of scalp hair onto lateral cheek; Prominent occiput; Pulmonary infiltrates; Pulmonary lymphangiomyomatosis; Renal angiomyolipoma; Renal cell carcinoma; Renal cyst; Restrictive ventilatory defect; Retinal hamartoma; Seizures; Shagreen patch; Skin tags; Somatic mutation; Specific learning disability; Sporadic; Subcutaneous nodule; Subependymal giant-cell astrocytoma; Subependymal nodules; Subungual fibromas; Ungual fibroma; Wolff-Parkinson-White syndrome
TSC216p13.3100%gene with protein product191092TSC4Abdominal pain; Abnormality of female internal genitalia; Achromatic retinal patches; Adenoma sebaceum; Adult onset; Angiofibromas; Astrocytoma; Astrocytosis; Atelectasis; Attention deficit hyperactivity disorder; Autism; Autosomal dominant inheritance; Behavioral abnormality; Cafe-au-lait spot; Cardiac rhabdomyoma; Cerebral calcification; Chest pain; Chordoma; Chylothorax; Cognitive impairment; Confetti-like hypopigmented macules; Cortical dysplasia; Cortical tubers; Cough; Dyspnea; EEG abnormality; Emphysema; Ependymoma; Focal seizures with impairment of consciousness or awareness; Focal white matter lesions; Gingival fibromatosis; Global developmental delay; Hematuria; Hemiparesis; Heterogeneous; Hypopigmented skin patches; Hypothyroidism; Infantile onset; Infantile spasms; Intellectual disability; Lymphadenopathy; Multiple cafe-au-lait spots; Nevus flammeus; Optic atrophy; Optic nerve glioma; Papule; Phenotypic variability; Pneumothorax; Precocious puberty; Prominent occiput; Pulmonary infiltrates; Pulmonary lymphangiomyomatosis; Renal angiomyolipoma; Renal cell carcinoma; Renal cyst; Restrictive ventilatory defect; Retinal hamartoma; Seizures; Shagreen patch; Skin tags; Somatic mutation; Specific learning disability; Sporadic; Subcutaneous nodule; Subependymal giant-cell astrocytoma; Subependymal nodules; Subungual fibromas; Ungual fibroma; Wolff-Parkinson-White syndrome


The gene coverage data provided by GeneDx represent an estimate based on previous results, but the specific sequencing coverage data for the genes selected may vary from individual to individual, and cannot be predicted exactly. Changes to an approved gene list can only be made by contacting GeneDx directly at 888-729-1206 and asking to speak with a member of our Whole Exome Sequencing Laboratory.


  SUGGESTED CUSTOM SLICES  

Customize below OR enter Suggested Slice ID on printed requisition form
(e.g. 706 XomeDxSlice - Slice ID: CS-Albinism).

Suggested Slice IDSuggested Gene List Name
CS-AlbinismAlbinism
CS-AAAplastic Anemia
CS-AutoImmuneAutoimmune Disorders
CS-BBSBardet-Biedl Syndrome
CS-BMFBone Marrow Failure Syndromes
CS-CVIDCommon Variable Immune Deficiency
CS-CKUTCongenital Kidney and Urinary Tract (CKUT) Anomalies
CS-DSDDisorders of Sex Development
CS-EDEctodermal Dysplasia
CS-FAFanconi Anemia
CS-AnemiaHemolytic Anemia
CS-HeterotaxyHeterotaxy
CS-IBDInflammatory Bowel Disease
CS-MaleInfMale Infertility
CS-WWSMuscular dystropy-dystroglycanopathy (Walker-Warburg)
CS-NephroticNephrotic Syndrome
CS-ObesityObesity
CS-PPKCIPalmoplantar keratoderma plus congenital ichthyosis
CS-Primary ImmunodefPrimary Immunodeficiency
CS-RhabdoRhabdomyolysis
CS-SRTDShort-Rib Thoracic Dysplasia
CS-VACTERLVACTERL Association
CS-WSWaardenburg Syndrome