XomeDxSlice Tool

Now Available - NEW XomeDxSlice Xpanded – Custom slice testing with trio analysis for lists >150 genes.

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Phenotypes
Amblyopia

Select all: Gene symbolChrAvg % covered at 10xLocus TypeNoteOMIMPrevious symbol(s)Phenotype(s)Slice(s)
B3GAT311q12.3100%gene with protein product606374Abnormally large globe; Accelerated skeletal maturation; Amblyopia; Aortic root aneurysm; Autosomal recessive inheritance; Bicuspid aortic valve; Bilateral elbow dislocations; Brachycephaly; Broad distal phalanges of all fingers; Cardiomegaly; Cleft palate; Congenital glaucoma; Cutis laxa; Depressed nasal bridge; Downslanted palpebral fissures; Elbow flexion contracture; Enlarged metaphyses; Esotropia; Frontal bossing; Hip dislocation; Hydrocephalus; Hypermetropia; Hypertelorism; Joint laxity; Knee dislocation; Left ventricular hypertrophy; Low posterior hairline; Low-set ears; Metatarsus adductus; Microdontia; Microtia; Midface retrusion; Mitral valve prolapse; Multiple joint dislocation; Narrow chest; Narrow mouth; Osteopenia; Patent foramen ovale; Pes planus; Prominent forehead; Radioulnar synostosis; Scoliosis; Short neck; Small face; Spatulate thumbs; Talipes equinovalgus; Talipes equinovarus; Thick eyebrow
CBS21q22.399.94%gene with protein product613381Abnormality of amino acid metabolism; Amblyopia; Arachnodactyly; Arterial thrombosis; Arteriovenous malformation; Autosomal recessive inheritance; Biconcave vertebral bodies; Brittle hair; Cerebral ischemia; Cutis marmorata; Dental crowding; Depressivity; Disproportionate tall stature; Ectopia lentis; Generalized osteoporosis; Genu valgum; Glaucoma; Hepatic steatosis; High palate; Homocystinuria; Hypertension; Hypopigmentation of the skin; Inguinal hernia; Intellectual disability; Joint stiffness; Kyphoscoliosis; Kyphosis; Limitation of joint mobility; Mitral valve prolapse; Myocardial infarction; Myopia; Osteoporosis; Pancreatitis; Pectus carinatum; Pectus excavatum; Personality disorder; Pulmonary embolism; Recurrent fractures; Scoliosis; Seizures; Sparse scalp hair; Stroke; Tall stature; Thromboembolism; Venous thrombosis
CHST310q22.1100%gene with protein product603799Abnormal form of the vertebral bodies; Abnormality of cardiovascular system morphology; Abnormally large globe; Accelerated skeletal maturation; Amblyopia; Aortic regurgitation; Aortic root aneurysm; Aortic valve stenosis; Arthralgia; Arthropathy; Autosomal dominant inheritance; Autosomal recessive inheritance; Barrel-shaped chest; Bicuspid aortic valve; Bilateral elbow dislocations; Bilateral single transverse palmar creases; Brachycephaly; Brachydactyly; Broad distal phalanges of all fingers; Broad forehead; Camptodactyly of finger; Cardiomegaly; Cleft palate; Congenital glaucoma; Coronal cleft vertebrae; Cubitus valgus; Cutis laxa; Decreased hip abduction; Delayed eruption of teeth; Delayed gross motor development; Delayed skeletal maturation; Depressed nasal bridge; Deviation of the 5th finger; Disproportionate short-trunk short stature; Downslanted palpebral fissures; Elbow dislocation; Elbow flexion contracture; Enlarged joints; Enlarged metaphyses; Esotropia; Fixed elbow flexion; Flattened epiphysis; Flexion contracture; Frontal bossing; Generalized bone demineralization; Genu valgum; Hearing impairment; High palate; Highly arched eyebrow; Hip dislocation; Hydrocephalus; Hypermetropia; Hypertelorism; Hypoplasia of the capital femoral epiphysis; Hypoplasia of the ulna; Intervertebral space narrowing; Irregular epiphyses; Irregular vertebral endplates; Joint laxity; Knee dislocation; Kyphoscoliosis; Left ventricular hypertrophy; Limited hip extension; Long philtrum; Low posterior hairline; Low-set ears; Lumbar hyperlordosis; Metatarsus adductus; Microdontia; Microtia; Midface retrusion; Mitral regurgitation; Mitral stenosis; Mitral valve prolapse; Motor delay; Multiple carpal ossification centers; Multiple joint dislocation; Narrow chest; Narrow mouth; Narrow vertebral interpedicular distance; Osteopenia; Patent foramen ovale; Pes planus; Prominent forehead; Pulmonary arterial hypertension; Pulmonic stenosis; Radioulnar synostosis; Rhizomelia; Scoliosis; Shield chest; Short distal phalanx of finger; Short femoral neck; Short metacarpal; Short neck; Short phalanx of finger; Shoulder dislocation; Small epiphyses; Small face; Sparse and thin eyebrow; Sparse eyebrow; Spatulate thumbs; Spondyloepiphyseal dysplasia; Talipes equinovalgus; Talipes equinovarus; Thick eyebrow; Tibial bowing; Tricuspid regurgitation; Tricuspid stenosis; Ulnar bowing; Ventricular hypertrophy; Ventricular septal defect; Waddling gait; Wide intermamillary distance; Widely spaced teeth
COL11A11p21.199.98%gene with protein product120280COLL6Abnormal diaphysis morphology; Abnormal form of the vertebral bodies; Abnormal vitreous humor morphology; Abnormality of the dentition; Abnormality of the metaphysis; Abnormality of the pinna; Absent frontal sinuses; Amblyopia; Anterior rib cupping; Anteverted nares; Arachnodactyly; Arthralgia; Arthropathy; Astigmatism; Autosomal dominant inheritance; Autosomal recessive inheritance; Bell-shaped thorax; Bifid uvula; Brachycephaly; Brachydactyly; Broad ischia; Broad long bones; Broad ribs; Calcification of falx cerebri; Camptodactyly; Cataract; Cerebral calcification; Cleft palate; Clinodactyly of the 5th finger; Congenital cataract; Corneal opacity; Coxa valga; Depressed nasal bridge; Downslanted palpebral fissures; Dumbbell-shaped long bone; Ectopia lentis; Epicanthus; Epiphyseal dysplasia; Esotropia; Femoral bowing; Fibular hypoplasia; Flat face; Frontal bossing; Genu valgum; Glaucoma; Glossoptosis; Hearing abnormality; High myopia; Hydrops fetalis; Hypertelorism; Hypohidrosis; Hypoplasia of the maxilla; Hypoplasia of the zygomatic bone; Hypoplastic fingernail; Hypoplastic frontal sinuses; Hypoplastic ilia; Hypoplastic ischia; Hypoplastic scapulae; Hypoplastic toenails; Hypotrichosis; Irregular distal femoral epiphysis; Irregular proximal tibial epiphyses; Irregular vertebral endplates; Joint contracture of the hand; Joint hyperflexibility; Joint hypermobility; Lens luxation; Long clavicles; Long fingers; Long philtrum; Low-set ears; Macrodontia of permanent maxillary central incisor; Malar flattening; Megalocornea; Meningeal calcification; Micrognathia; Micromelia; Midface retrusion; Myopia; Narrow chest; Narrow greater sacrosciatic notches; Narrow mouth; Omphalocele; Osteoarthritis; Patent foramen ovale; Pierre-Robin sequence; Platyspondyly; Posterior rib cupping; Posterior vertebral hypoplasia; Premature birth; Proptosis; Protuberant abdomen; Radial bowing; Respiratory insufficiency; Retinal detachment; Retinopathy; Rhizomelia; Round face; Sensorineural hearing impairment; Short femur; Short foot; Short long bone; Short neck; Short nose; Short palm; Short ribs; Short stature; Small distal femoral epiphysis; Small hand; Small proximal tibial epiphyses; Spondyloepiphyseal dysplasia; Stillbirth; Thick lower lip vermilion; Thick upper lip vermilion; Thickened calvaria; Thin clavicles; Thin ribs; Thoracic hypoplasia; Ulnar bowing; Upper airway obstruction; Visual impairment; Vitreoretinal degeneration; Wide anterior fontanel; Wide nasal bridge; Wide tufts of distal phalanges; Widely patent coronal suture; Widely patent sagittal sutureEctodermal Dysplasia
COL11A11p21.199.98%gene with protein product120280COLL6Abnormal diaphysis morphology; Abnormal form of the vertebral bodies; Abnormal vitreous humor morphology; Abnormality of the dentition; Abnormality of the metaphysis; Abnormality of the pinna; Absent frontal sinuses; Amblyopia; Anterior rib cupping; Anteverted nares; Arachnodactyly; Arthralgia; Arthropathy; Astigmatism; Autosomal dominant inheritance; Autosomal recessive inheritance; Bell-shaped thorax; Bifid uvula; Brachycephaly; Brachydactyly; Broad ischia; Broad long bones; Broad ribs; Calcification of falx cerebri; Camptodactyly; Cataract; Cerebral calcification; Cleft palate; Clinodactyly of the 5th finger; Congenital cataract; Corneal opacity; Coxa valga; Depressed nasal bridge; Downslanted palpebral fissures; Dumbbell-shaped long bone; Ectopia lentis; Epicanthus; Epiphyseal dysplasia; Esotropia; Femoral bowing; Fibular hypoplasia; Flat face; Frontal bossing; Genu valgum; Glaucoma; Glossoptosis; Hearing abnormality; High myopia; Hydrops fetalis; Hypertelorism; Hypohidrosis; Hypoplasia of the maxilla; Hypoplasia of the zygomatic bone; Hypoplastic fingernail; Hypoplastic frontal sinuses; Hypoplastic ilia; Hypoplastic ischia; Hypoplastic scapulae; Hypoplastic toenails; Hypotrichosis; Irregular distal femoral epiphysis; Irregular proximal tibial epiphyses; Irregular vertebral endplates; Joint contracture of the hand; Joint hyperflexibility; Joint hypermobility; Lens luxation; Long clavicles; Long fingers; Long philtrum; Low-set ears; Macrodontia of permanent maxillary central incisor; Malar flattening; Megalocornea; Meningeal calcification; Micrognathia; Micromelia; Midface retrusion; Myopia; Narrow chest; Narrow greater sacrosciatic notches; Narrow mouth; Omphalocele; Osteoarthritis; Patent foramen ovale; Pierre-Robin sequence; Platyspondyly; Posterior rib cupping; Posterior vertebral hypoplasia; Premature birth; Proptosis; Protuberant abdomen; Radial bowing; Respiratory insufficiency; Retinal detachment; Retinopathy; Rhizomelia; Round face; Sensorineural hearing impairment; Short femur; Short foot; Short long bone; Short neck; Short nose; Short palm; Short ribs; Short stature; Small distal femoral epiphysis; Small hand; Small proximal tibial epiphyses; Spondyloepiphyseal dysplasia; Stillbirth; Thick lower lip vermilion; Thick upper lip vermilion; Thickened calvaria; Thin clavicles; Thin ribs; Thoracic hypoplasia; Ulnar bowing; Upper airway obstruction; Visual impairment; Vitreoretinal degeneration; Wide anterior fontanel; Wide nasal bridge; Wide tufts of distal phalanges; Widely patent coronal suture; Widely patent sagittal sutureEctodermal Dysplasia
COL9A16q1399.94%gene with protein product120210Abnormality of epiphysis morphology; Abnormality of the knee; Amblyopia; Arthralgia; Arthralgia of the hip; Astigmatism; Autosomal dominant inheritance; Autosomal recessive inheritance; Cataract; Childhood onset; Cleft palate; Degenerative vitreoretinopathy; Epiphyseal dysplasia; Flat capital femoral epiphysis; Flat distal femoral epiphysis; Flat face; Gait disturbance; Genu valgum; High myopia; Hip dysplasia; Irregular distal femoral epiphysis; Irregular epiphyses; Irregular vertebral endplates; Joint hyperflexibility; Limitation of joint mobility; Malar flattening; Micrognathia; Micromelia; Multiple epiphyseal dysplasia; Myopia; Osteoarthritis; Platyspondyly; Retinal detachment; Sensorineural hearing impairment; Short stature; Small epiphyses; Vitreoretinal degeneration
COL9A21p34.2100%gene with protein product120260EDM2Abnormality of epiphysis morphology; Amblyopia; Arthralgia; Astigmatism; Autosomal dominant inheritance; Autosomal recessive inheritance; Cataract; Childhood onset; Cleft palate; Epiphyseal dysplasia; Flat face; Flattened epiphysis; Gait disturbance; Genu valgum; Genu varum; Heterogeneous; High myopia; Hip dysplasia; Irregular epiphyses; Irregular vertebral endplates; Joint hyperflexibility; Knee osteoarthritis; Limitation of joint mobility; Malar flattening; Micrognathia; Micromelia; Mild short stature; Myopia; Osteoarthritis; Platyspondyly; Retinal detachment; Sensorineural hearing impairment; Short palm; Short stature; Small epiphyses; Vitreoretinal degeneration; Waddling gait
COL9A320q13.3399.98%gene with protein product120270Abnormality of epiphysis morphology; Abnormality of the hip joint; Amblyopia; Arthralgia; Astigmatism; Autosomal dominant inheritance; Cataract; Cleft palate; Delayed epiphyseal ossification; Epiphyseal dysplasia; Flat face; Gait disturbance; Genu valgum; Heterogeneous; Hip dysplasia; Irregular epiphyses; Irregular vertebral endplates; Joint hyperflexibility; Limitation of joint mobility; Malar flattening; Micrognathia; Micromelia; Mild short stature; Mildly elevated creatine phosphokinase; Myopia; Osteoarthritis; Platyspondyly; Proximal muscle weakness; Retinal detachment; Sensorineural hearing impairment; Short metacarpal; Short stature; Small epiphyses; Vitreoretinal degeneration
CRYAA21q22.3100%gene with protein product123580CRYA1Amblyopia; Autosomal dominant inheritance; Cataract; Congenital cataract; Glaucoma; Microcornea; Myopia; Nystagmus; Strabismus; Visual impairment
CRYGC2q33.3100%gene with protein product123680CRYG3Amblyopia; Autosomal dominant inheritance; Cataract; Congenital nuclear cataract; Microcornea; Myopia; Nystagmus; Visual impairment
DPP67q36.216.3%gene with protein product126141Alternating esotropia; Amblyopia; Attention deficit hyperactivity disorder; Autosomal dominant inheritance; Chorioretinal degeneration; Decreased body weight; Delayed skeletal maturation; Intellectual disability; Microcephaly; Reduced number of teeth; Scoliosis; Short stature
GPR143Xp22.296.98%gene with protein product300808OA1Abnormal pupil morphology; Amblyopia; Astigmatism; Depigmented fundus; Freckling; Giant melanosomes in melanocytes; Horizontal nystagmus; Hyperopic astigmatism; Hypoplasia of the fovea; Nystagmus; Nystagmus-induced head nodding; Ocular albinism; Photophobia; Strabismus; Visual impairment; X-linked inheritanceAlbinism ; Palmoplantar keratoderma plus congenital ichthyosis
HIST1H1E6p22.2100%gene with protein product142220H1F4Accelerated skeletal maturation; Amblyopia; Astigmatism; Autosomal dominant inheritance; Camptodactyly; Full cheeks; Global developmental delay; Hypertonia; Intellectual disability; Kyphoscoliosis; Macrocephaly; Neonatal hypotonia; Nevus; Strabismus; Talipes equinovarus; Telecanthus
LAMA118p11.31100%gene with protein product150320LAMAAbnormality of the periventricular white matter; Amblyopia; Autosomal recessive inheritance; Cerebellar cyst; Cerebellar dysplasia; Cerebellar vermis hypoplasia; Delayed speech and language development; Dilated fourth ventricle; Motor delay; Myopia; Nystagmus; Oculomotor apraxia; Retinal atrophy; Retinal dystrophy; Retinal thinning; Strabismus; Variable expressivity
LYST1q42.399.95%gene with protein product606897CHS1Abnormality of coagulation; Abnormality of multiple cell lineages in the bone marrow; Amblyopia; Anemia; Areflexia; Autosomal recessive inheritance; Bruising susceptibility; Cranial nerve paralysis; Decreased nerve conduction velocity; Edema; Epistaxis; Fever; Foot dorsiflexor weakness; Gait disturbance; Generalized hypopigmentation; Giant melanosomes in melanocytes; Gingival bleeding; Gingivitis; Global developmental delay; Hepatomegaly; Hypopigmentation of hair; Hypopigmentation of the skin; Hyporeflexia; Immunodeficiency; Intellectual disability; Iris hypopigmentation; Jaundice; Leukopenia; Lymphadenopathy; Lymphoma; Macular hypoplasia; Neurodegeneration; Neutropenia; Nystagmus; Ocular albinism; Paresthesia; Periodontitis; Peripheral neuropathy; Photophobia; Progressive peripheral neuropathy; Recurrent bacterial skin infections; Recurrent cutaneous abscess formation; Recurrent respiratory infections; Recurrent systemic pyogenic infections; Reduced visual acuity; Seizures; Skin ulcer; Splenomegaly; Strabismus; Thrombocytopenia; Tremor; Visual impairment; White hairAlbinism ; Aplastic Anemia ; Autoimmune Disorders ; Bone Marrow Failure Syndromes ; Primary Immunodeficiency
NPHP41p36.31100%gene with protein product607215Abnormality of retinal pigmentation; Amblyopia; Anemia; Autosomal recessive inheritance; Global developmental delay; Growth delay; Heterogeneous; Hypertension; Nephronophthisis; Polydipsia; Polyuria; Premature ovarian insufficiency; Progressive visual loss; Renal corticomedullary cysts; Retinal dystrophy; Rod-cone dystrophy; Rotary nystagmus; Severe visual impairment; Short stature; Stage 5 chronic kidney disease; Tubular atrophy; Tubulointerstitial fibrosis; Visual impairment
OCRLXq26.199.83%gene with protein product300535Abnormal pupil morphology; Abnormality of calcium-phosphate metabolism; Abnormality of the renal tubule; Abnormality of the voice; Aggressive behavior; Amblyopia; Aminoaciduria; Anxiety; Areflexia; Arthritis; Attention deficit hyperactivity disorder; Benign neoplasm of the central nervous system; Bicarbonaturia; Buphthalmos; Camptodactyly of finger; Cataract; Childhood onset; Chronic kidney disease; Clonus; Cognitive impairment; Congenital cataract; Constipation; Cryptorchidism; Deeply set eye; Dehydration; Dense posterior cortical cataract; Depressivity; Dysphasia; EEG abnormality; Elevated amniotic fluid alpha-fetoprotein; Elevated maternal serum alpha-fetoprotein; Elevated serum acid phosphatase; Elevated serum creatine phosphokinase; Failure to thrive; Feeding difficulties in infancy; Fine hair; Finger swelling; Frontal bossing; Full cheeks; Generalized hypopigmentation; Genu valgum; Glaucoma; Global developmental delay; Glomerulopathy; Hip dislocation; Hypercalciuria; Hypercholesterolemia; Hyperparathyroidism; Hyperphosphaturia; Hypokalemia; Hyponatremia; Hypoplasia of dental enamel; Intellectual disability; Joint hyperflexibility; Joint hypermobility; Joint swelling; Kyphosis; Long face; Low-molecular-weight proteinuria; Low-set, posteriorly rotated ears; Microphthalmia; Neonatal hypotonia; Neoplasm of the skin; Nystagmus; Obsessive-compulsive behavior; Osteomalacia; Pathologic fracture; Periventricular cysts; Platyspondyly; Proteinuria; Protruding ear; Proximal renal tubular acidosis; Proximal tubulopathy; Recurrent fractures; Reduced visual acuity; Renal Fanconi syndrome; Renal insufficiency; Rickets; Scoliosis; Seizures; Self-injurious behavior; Short stature; Sparse scalp hair; Stereotypy; Subcutaneous nodule; Thrombocytopenia; Ventriculomegaly; Visual impairment; Vitamin D deficiency; Wrist swelling; X-linked recessive inheritance
PAX611p1399.98%gene with protein product607108AN2Abnormal best corrected visual acuity test; Abnormality of movement; Abnormality of retinal pigmentation; Abnormality of the optic disc; Abnormality of the vagina; Abnormality of vision; Amblyopia; Aniridia; Anterior synechiae of the anterior chamber; Aplasia/Hypoplasia of the iris; Aplasia/Hypoplasia of the macula; Ataxia; Autosomal dominant inheritance; Autosomal recessive inheritance; Cataract; Central opacification of the cornea; Cerebellar hypoplasia; Chorioretinal coloboma; Congenital glaucoma; Congenital nystagmus; Contiguous gene syndrome; Corneal opacity; Cryptorchidism; Displacement of the external urethral meatus; EEG abnormality; Everted lower lip vermilion; Generalized hyperpigmentation; Glaucoma; Global developmental delay; Hearing abnormality; Hypoplasia of the corpus callosum; Hypoplasia of the fovea; Hypoplasia of the iris; Hypospadias; Intellectual disability; Keratitis; Mask-like facies; Microcephaly; Micrognathia; Motor delay; Muscular hypotonia; Nephroblastoma; Nystagmus; Opacification of the corneal stroma; Optic atrophy; Optic disc hypoplasia; Optic nerve aplasia; Optic nerve coloboma; Optic nerve hypoplasia; Peripheral vitreous opacities; Peters anomaly; Postural tremor; Presenile cataracts; Pseudopapilledema; Ptosis; Reduced visual acuity; Retinal detachment; Scanning speech; Short stature; Slurred speech; Somatic mutation; Strabismus; Streak ovary; Subcapsular cataract; Thinning of Descemet membrane; Visual impairment; Visual loss
PHOX2A11q13.499.99%gene with protein product602753ARIX, FEOM2Amblyopia; Autosomal recessive inheritance; Bilateral ptosis; Congenital fibrosis of extraocular muscles; Exotropia; Restrictive external ophthalmoplegia; Visual impairment
PIGN18q21.3398.85%gene with protein product606097Abnormal cardiac septum morphology; Absent speech; Agenesis of corpus callosum; Amblyopia; Anal atresia; Anal stenosis; Anteverted nares; Aplasia/Hypoplasia of the nipples; Atrial septal defect; Autosomal recessive inheritance; Broad forehead; Cerebral atrophy; Cerebral cortical atrophy; Choreoathetosis; Cleft palate; Clinodactyly of the 5th finger; Coarse facial features; Congenital diaphragmatic hernia; Congenital onset; Corneal opacity; Cryptorchidism; Cupped ear; Depressed nasal bridge; Epicanthus; Frontal bossing; Gastroesophageal reflux; Generalized hypotonia; Global developmental delay; High palate; Hydrocele testis; Hydronephrosis; Hyperreflexia; Hypertelorism; Hypoplastic fingernail; Hyporeflexia; Intellectual disability; Large fleshy ears; Long philtrum; Low-set ears; Low-set, posteriorly rotated ears; Macrocephaly; Median cleft lip; Micrognathia; Multicystic kidney dysplasia; Narrow forehead; Non-midline cleft lip; Nystagmus; Open mouth; Overfolded helix; Patent ductus arteriosus; Polyhydramnios; Posteriorly rotated ears; Pulmonary hypoplasia; Seizures; Severe global developmental delay; Short distal phalanx of finger; Short neck; Short nose; Spasticity; Tented upper lip vermilion; Tetralogy of Fallot; Thickened nuchal skin fold; Thin vermilion border; Tremor; Variable expressivity; Wide intermamillary distance; Wide mouth; Wide nasal bridge
PTEN10q23.3199.95%gene with protein productPromoter/regulatory variants are not captured by XomeDxSlice. 601728BZS, MHAMAbnormal form of the vertebral bodies; Abnormal heart morphology; Abnormal lung lobation; Abnormal pupil morphology; Abnormal subcutaneous fat tissue distribution; Abnormal vertebral morphology; Abnormality of metabolism/homeostasis; Abnormality of the eye; Abnormality of the fallopian tube; Abnormality of the large intestine; Abnormality of the parathyroid gland; Abnormality of the penis; Abnormality of the vasculature; Abnormally prominent line of Schwalbe; Absent thumb; Acanthosis nigricans; Acrokeratosis; Adenoma sebaceum; Adult onset; Amblyopia; Anal atresia; Angioid streaks of the fundus; Angiokeratoma; Aqueductal stenosis; Arteriovenous malformation; Asymmetry of the thorax; Ataxia; Atypical nevi in non-sun exposed areas; Atypical nevus; Autism; Autosomal dominant inheritance; Autosomal recessive inheritance; Biparietal narrowing; Birth length greater than 97th percentile; Breast carcinoma; Broad forehead; Bronchogenic cyst; Cachexia; Cafe-au-lait spot; Calvarial hyperostosis; Capillary hemangiomas; Cataract; Cavernous hemangioma; Cognitive impairment; Colonic diverticula; Colorectal polyposis; Communicating hydrocephalus; Conjunctival hamartoma; Cranial nerve paralysis; Cutaneous melanoma; Decreased muscle mass; Delayed gross motor development; Delayed speech and language development; Depressed nasal bridge; Disproportionate tall stature; Dolichocephaly; Downslanted palpebral fissures; Dysplastic gangliocytoma of the cerebellum; Endometrial carcinoma; Enlarged cerebellum; Epibulbar dermoid; Epidermal nevus; Excessive wrinkled skin; Exostoses; Fibroadenoma of the breast; Finger syndactyly; Follicular thyroid carcinoma; Frontal bossing; Furrowed tongue; Generalized hyperkeratosis; Generalized hypotonia; Genu recurvatum; Global developmental delay; Goiter; Gynecomastia; Hamartomatous polyposis; Hand polydactyly; Hashimoto thyroiditis; Headache; Hearing impairment; Hemangioma; Hematochezia; Heterochromia iridis; High palate; Hydrocele testis; Hydrocephalus; Hyperostosis; Hypertelorism; Hyperthyroidism; Hypoglycemia; Hypoplasia of the maxilla; Hypothyroidism; Increased intracranial pressure; Intellectual disability; Intellectual disability, mild; Intention tremor; Intestinal polyposis; Intraocular melanoma; Intussusception; Irregular hyperpigmentation; Joint hypermobility; Juvenile onset; Kyphosis; Lipoma; Long penis; Long philtrum; Lower limb asymmetry; Lymphangioma; Lymphedema; Macrocephaly; Macrodactyly; Macroglossia; Macrotia; Macule; Mandibular prognathia; Melanocytic nevus; Meningioma; Micrognathia; Mucosal telangiectasiae; Multiple cafe-au-lait spots; Multiple lipomas; Myopathy; Myopia; Narrow mouth; Nausea and vomiting; Neoplasm of the breast; Neoplasm of the thyroid gland; Nevus; Non-medullary thyroid carcinoma; Numerous nevi; Obesity; Open bite; Ovarian carcinoma; Ovarian cyst; Ovarian neoplasm; Palmoplantar hyperkeratosis; Palmoplantar keratoderma; Papilloma; Papule; Pectus excavatum; Polymicrogyria; Postnatal growth retardation; Postnatal macrocephaly; Primary peritoneal carcinoma; Progressive macrocephaly; Pseudopapilledema; Pulmonary embolism; Radial club hand; Reduced bone mineral density; Renal hypoplasia; Respiratory failure; Retinal detachment; Round face; Scoliosis; Seizures; Shagreen patch; Short nose; Short stature; Skeletal dysplasia; Skin tags; Squamous cell carcinoma; Stillbirth; Strabismus; Subcutaneous hemorrhage; Subcutaneous lipoma; Subcutaneous nodule; Supernumerary nipple; Thick corpus callosum; Thrombophlebitis; Thyroid adenoma; Thyroiditis; Transitional cell carcinoma of the bladder; Trichilemmoma; Upper limb asymmetry; Varicocele; Vascular skin abnormality; Venous insufficiency; Visceral angiomatosisInflammatory Bowel Disease ; Obesity; VACTERL Association
SMCHD118p11.3299.84%gene with protein productXomeDxSlice is not an appropriate test to evaluate for SMCHD1 variation associated with facioscapulohumeral muscular dystrophy (FSHD) unless southern blot (for FSHD1) and/or methylation studies) have already been performed elsewhere.614982Abdominal wall muscle weakness; Abnormality of the eyelashes; Abnormality of the midface; Abnormality of the retinal vasculature; Absent nares; Amblyopia; Anophthalmia; Anosmia; Aplasia of the nose; Autosomal dominant inheritance; Blindness; Cataract; Choanal atresia; Cleft palate; Coloboma; Cryptorchidism; Digenic inheritance; Elevated serum creatine phosphokinase; EMG abnormality; Facial palsy; Failure of eruption of permanent teeth; Foot dorsiflexor weakness; Gynecomastia; High palate; Hyperlordosis; Hypertelorism; Hypogonadism; Hypoplasia of penis; Hypoplasia of the olfactory bulb; Hyposmia; Inguinal hernia; Iris coloboma; Mask-like facies; Micropenis; Microphthalmia; Midface retrusion; Misalignment of teeth; Palpebral edema; Pelvic girdle muscle weakness; Primary amenorrhea; Scapulohumeral muscular dystrophy; Sensorineural hearing impairment; Single naris; Skeletal muscle atrophy; Visual loss
TBX122q11.2194.16%gene with protein product602054VCFAbnormal aortic arch morphology; Abnormal pulmonary valve morphology; Abnormality of metabolism/homeostasis; Abnormality of the ear; Abnormality of the endocrine system; Abnormality of the hand; Abnormality of the middle ear; Abnormality of the pharynx; Abnormality of the thymus; Abnormality of the tonsils; Acne; Aggressive behavior; Amblyopia; Arachnodactyly; Atrial septal defect; Attention deficit hyperactivity disorder; Autosomal dominant inheritance; Autosomal recessive inheritance; Bifid uvula; Bipolar affective disorder; Blepharophimosis; Broad forehead; Broad hallux; Bulbous nose; Carious teeth; Cholelithiasis; Chronic otitis media; Cleft palate; Clinodactyly of the 5th finger; Coarctation of aorta; Complete atrioventricular canal defect; Conductive hearing impairment; Constipation; Corneal neovascularization; Delayed speech and language development; Depressed nasal ridge; Double outlet right ventricle; Downslanted palpebral fissures; Dysphasia; Epicanthus; Esophoria; Esotropia; Exotropia; Femoral hernia; Global developmental delay; High forehead; High, narrow palate; Hydronephrosis; Hypertelorism; Hypocalcemia; Hypoparathyroidism; Hypoplasia of the thymus; Hypothyroidism; Immunodeficiency; Impaired T cell function; Inguinal hernia; Intellectual disability; Intellectual disability, mild; Interrupted aortic arch; Long face; Long philtrum; Low-set ears; Malar flattening; Microcephaly; Micrognathia; Midface retrusion; Mood swings; Muscular hypotonia; Myalgia; Narrow face; Nasal speech; Neurological speech impairment; Obesity; Occipital myelomeningocele; Open mouth; Overfolded helix; Paranoia; Parathyroid agenesis; Parathyroid hypoplasia; Patent ductus arteriosus; Pierre-Robin sequence; Platybasia; Postaxial polydactyly; Posterior embryotoxon; Preauricular pit; Prominent nasal bridge; Proptosis; Ptosis; Recurrent infections; Renal dysplasia; Renal hypoplasia; Retinal vascular tortuosity; Retrognathia; Right aortic arch with mirror image branching; Sclerocornea; Scoliosis; Seborrheic dermatitis; Seizures; Short neck; Short palpebral fissure; Short philtrum; Short stature; Small earlobe; Specific learning disability; Telecanthus; Tetany; Tetralogy of Fallot; Transposition of the great arteries; Truncus arteriosus; Umbilical hernia; Underdeveloped nasal alae; Unilateral primary pulmonary dysgenesis; Unilateral renal agenesis; Upslanted palpebral fissure; Velopharyngeal insufficiency; Ventricular septal defect; Wide nasal bridgeAutoimmune Disorders ; Disorders of Sex Development; Primary Immunodeficiency
TUBB316q24.3100%gene with protein product602661FEOM3Agenesis of corpus callosum; Amblyopia; Autosomal dominant inheritance; Compensatory chin elevation; Congenital fibrosis of extraocular muscles; Congenital onset; Cortical dysplasia; Exotropia; Global developmental delay; Hypoplasia of the brainstem; Hypoplasia of the corpus callosum; Intellectual disability, moderate; Levator palpebrae superioris atrophy; Lissencephaly; Microcephaly; Muscular hypotonia of the trunk; Nonprogressive restrictive external ophthalmoplegia; Nystagmus; Phenotypic variability; Polymicrogyria; Ptosis; Spasticity; Strabismus; Superior rectus atrophy; Variable expressivity
XYLT217q21.33100%gene with protein product608125Abnormal eyebrow morphology; Abnormality of the intervertebral disk; Amblyopia; Aplasia/Hypoplasia of the lens; Atrial septal defect; Autosomal recessive inheritance; Cataract; Disproportionate short-trunk short stature; Facial hypotonia; Hypertelorism; Iris hypopigmentation; Long fingers; Long toe; Low posterior hairline; Low-set ears; Microphthalmia; Mitral valve prolapse; Muscle weakness; Nystagmus; Osteopenia; Osteoporosis; Pes planus; Platyspondyly; Posteriorly rotated ears; Retinal detachment; Sensorineural hearing impairment; Shield chest; Short neck; Thoracic kyphosis; Ventricular septal defect; Vertebral compression fractures; Visual loss; Webbed neck
YME1L110p12.199.61%gene with protein product607472Amblyopia; Autosomal recessive inheritance; Brain atrophy; Cerebellar hypoplasia; Dysmetria; Facial diplegia; Global developmental delay; Hyperactivity; Hyperkinesis; Hypermetropia; Infantile onset; Intellectual disability; Leukoencephalopathy; Macrocephaly; Macrotia; Microcephaly; Midface retrusion; Myopia; Optic atrophy; Short stature; Strabismus; Visual impairment


The gene coverage data provided by GeneDx represent an estimate based on previous results, but the specific sequencing coverage data for the genes selected may vary from individual to individual, and cannot be predicted exactly. Changes to an approved gene list can only be made by contacting GeneDx directly at 888-729-1206 and asking to speak with a member of our Whole Exome Sequencing Laboratory.


  SUGGESTED CUSTOM SLICES  

Customize below OR enter Suggested Slice ID on printed requisition form
(e.g. 706 XomeDxSlice - Slice ID: CS-Albinism).

Suggested Slice IDSuggested Gene List Name
CS-AlbinismAlbinism
CS-AAAplastic Anemia
CS-AutoImmuneAutoimmune Disorders
CS-BBSBardet-Biedl Syndrome
CS-BMFBone Marrow Failure Syndromes
CS-CVIDCommon Variable Immune Deficiency
CS-CKUTCongenital Kidney and Urinary Tract (CKUT) Anomalies
CS-DSDDisorders of Sex Development
CS-EDEctodermal Dysplasia
CS-FAFanconi Anemia
CS-AnemiaHemolytic Anemia
CS-HeterotaxyHeterotaxy
CS-IBDInflammatory Bowel Disease
CS-MaleInfMale Infertility
CS-WWSMuscular dystropy-dystroglycanopathy (Walker-Warburg)
CS-NephroticNephrotic Syndrome
CS-ObesityObesity
CS-PPKCIPalmoplantar keratoderma plus congenital ichthyosis
CS-Primary ImmunodefPrimary Immunodeficiency
CS-RhabdoRhabdomyolysis
CS-SRTDShort-Rib Thoracic Dysplasia
CS-VACTERLVACTERL Association
CS-WSWaardenburg Syndrome