XomeDxSlice Tool

Now Available - NEW XomeDxSlice Xpanded – Custom slice testing with trio analysis for lists >150 genes.

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SELECTED GENES FOR YOUR SLICE

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Phenotypes
Abnormality of the optic disc

Select all: Gene symbolChrAvg % covered at 10xLocus TypeNoteOMIMPrevious symbol(s)Phenotype(s)Slice(s)
AIPL117p13.2100%gene with protein product604392LCA4Abnormal electroretinogram; Abnormality of color vision; Abnormality of neuronal migration; Abnormality of retinal pigmentation; Abnormality of the optic disc; Aplasia/Hypoplasia of the cerebellar vermis; Attenuation of retinal blood vessels; Autosomal recessive inheritance; Cataract; Cone/cone-rod dystrophy; Constriction of peripheral visual field; Encephalocele; Hemiplegia/hemiparesis; Keratoconus; Macular atrophy; Muscular hypotonia; Nyctalopia; Nystagmus; Optic disc pallor; Pendular nystagmus; Photophobia; Reduced visual acuity; Rod-cone dystrophy; Seizures; Severe visual impairment; Undetectable light- and dark-adapted electroretinogram
CEP29012q21.3298.28%gene with protein product610142Abnormal chorioretinal morphology; Abnormal electroretinogram; Abnormality of neuronal migration; Abnormality of retinal pigmentation; Abnormality of the nervous system; Abnormality of the optic disc; Agenesis of cerebellar vermis; Aplasia/Hypoplasia of the cerebellar vermis; Aplasia/Hypoplasia of the iris; Apnea; Ataxia; Atrial septal defect; Autistic behavior; Autosomal recessive inheritance; Bile duct proliferation; Biparietal narrowing; Blindness; Cataract; Central apnea; Cerebellar vermis hypoplasia; Chorioretinal coloboma; Cleft palate; Congenital blindness; Congenital hepatic fibrosis; Cryptorchidism; Dandy-Walker malformation; Depressed nasal ridge; Encephalocele; Episodic tachypnea; Full cheeks; Generalized hypotonia; Global developmental delay; Hemiplegia/hemiparesis; Hypertelorism; Hypertension; Hypogonadism; Hypoplasia of penis; Hypoplasia of the corpus callosum; Hypoplasia of the ovary; Hyposmia; Impaired renal concentrating ability; Intellectual disability; Intrauterine growth retardation; Iris coloboma; Keratoconus; Lobar holoprosencephaly; Long face; Low-set, posteriorly rotated ears; Microcephaly; Microcornea; Micrognathia; Microphthalmia; Molar tooth sign on MRI; Multicystic kidney dysplasia; Muscular hypotonia; Neonatal breathing dysregulation; Nephronophthisis; Nephropathy; Nystagmus; Obesity; Oculomotor apraxia; Oligohydramnios; Optic atrophy; Pigmentary retinopathy; Postaxial foot polydactyly; Postaxial hand polydactyly; Premature ovarian insufficiency; Progressive visual loss; Ptosis; Reduced visual acuity; Renal cortical cysts; Renal cyst; Retinal coloboma; Retinal dystrophy; Rod-cone dystrophy; Sclerocornea; Seizures; Severe visual impairment; Short stature; Sloping forehead; Stage 5 chronic kidney disease; Tachypnea; Talipes; Tapetoretinal degeneration; Thickened superior cerebellar peduncle; Ventricular septal defect; Visual impairmentBardet-Biedl Syndrome ; Heterotaxy ; Obesity
CRB11q31.3100%gene with protein product604210RP12Abnormal electroretinogram; Abnormality of neuronal migration; Abnormality of retinal pigmentation; Abnormality of the optic disc; Abnormality of the retinal vasculature; Abnormality of the testis; Anteverted nares; Aplasia/Hypoplasia of the cerebellar vermis; Atypical scarring of skin; Autosomal recessive inheritance; Blindness; Bone spicule pigmentation of the retina; Cataract; Conductive hearing impairment; Encephalocele; Esotropia; Glaucoma; Hemiplegia/hemiparesis; High hypermetropia; Hyperinsulinemia; Hypermetropia; Hypogonadism; Hypoplasia of penis; Intellectual disability; Keratoconus; Muscular hypotonia; Nystagmus; Obesity; Ophthalmoplegia; Optic atrophy; Paravenous chorioretinal atrophy; Pendular nystagmus; Photophobia; Progressive night blindness; Rod-cone dystrophy; Seizures; Sensorineural hearing impairment; Severe visual impairment; Undetectable electroretinogram; Visual impairment; Vitreoretinal degeneration; Wide nasal bridge
CRX19q13.33100%gene with protein product602225CORD2Abnormal electroretinogram; Abnormality of color vision; Abnormality of neuronal migration; Abnormality of retinal pigmentation; Abnormality of the optic disc; Abnormality of the retinal vasculature; Abnormality of the testis; Anteverted nares; Aplasia/Hypoplasia of the cerebellar vermis; Atypical scarring of skin; Autosomal dominant inheritance; Autosomal recessive inheritance; Blindness; Cataract; Chorioretinal atrophy; Conductive hearing impairment; Cone/cone-rod dystrophy; Constriction of peripheral visual field; Encephalocele; Glaucoma; Hemiplegia/hemiparesis; Hyperinsulinemia; Hypogonadism; Hypoplasia of penis; Intellectual disability; Keratoconus; Muscular hypotonia; Nyctalopia; Nystagmus; Obesity; Ophthalmoplegia; Optic atrophy; Pendular nystagmus; Peripheral visual field loss; Photophobia; Progressive night blindness; Reduced visual acuity; Rod-cone dystrophy; Seizures; Sensorineural hearing impairment; Severe visual impairment; Undetectable electroretinogram; Visual impairment; Wide nasal bridge
GDF68q22.1100%gene with protein product601147SGM1Abnormal electroretinogram; Abnormal vertebral segmentation and fusion; Abnormality of neuronal migration; Abnormality of retinal pigmentation; Abnormality of the optic disc; Abnormality of the ribs; Abnormality of the shoulder; Absent testis; Aplasia/Hypoplasia of the cerebellar vermis; Autosomal dominant inheritance; Autosomal recessive inheritance; Bilateral microphthalmos; Cataract; Cervical C2/C3 vertebral fusion; Cervicomedullary schisis; Coloboma; Congenital muscular torticollis; Digenic inheritance; Encephalocele; Facial asymmetry; Hearing impairment; Hemiplegia/hemiparesis; Heterogeneous; Hypoplasia of the fovea; Keratoconus; Limited neck range of motion; Low posterior hairline; Microphthalmia; Muscular hypotonia; Nystagmus; Optic disc hypoplasia; Scoliosis; Seizures; Severe visual impairment; Short neck; Sprengel anomaly; Variable expressivity; Visual impairment; Webbed neck
GUCY2D17p13.1100%gene with protein product600179CORD6, LCA, GUC2D, GUC1A4Abnormal electroretinogram; Abnormality of color vision; Abnormality of neuronal migration; Abnormality of retinal pigmentation; Abnormality of the optic disc; Aplasia/Hypoplasia of the cerebellar vermis; Autosomal dominant inheritance; Autosomal recessive inheritance; Blindness; Cataract; Childhood onset; Choriocapillaris atrophy; Chorioretinal atrophy; Cone/cone-rod dystrophy; Decreased light- and dark-adapted electroretinogram amplitude; Encephalocele; Eye poking; Fundus atrophy; Growth delay; Hemiplegia/hemiparesis; Hepatomegaly; Hyperthreoninemia; Hyperthreoninuria; Intellectual disability; Keratoconus; Muscular hypotonia; Nyctalopia; Nystagmus; Peripheral visual field loss; Photophobia; Pigmentary retinopathy; Reduced visual acuity; Seizures; Sensorineural hearing impairment; Severe visual impairment
IFT14016p13.3100%gene with protein product614620WDTC2Abnormal electroretinogram; Abnormality of neuronal migration; Abnormality of pelvic girdle bone morphology; Abnormality of retinal pigmentation; Abnormality of the clavicle; Abnormality of the metaphysis; Abnormality of the optic disc; Abnormality of the retinal vasculature; Abnormality of the ribs; Abnormality of the sternum; Abnormality of the testis; Anemia; Anteverted nares; Aplasia/Hypoplasia of the cerebellar vermis; Ataxia; Atypical scarring of skin; Autosomal recessive inheritance; Blindness; Brachydactyly; Cataract; Cholestasis; Conductive hearing impairment; Cone-shaped epiphysis; Encephalocele; Glaucoma; Hemiplegia/hemiparesis; Hepatic fibrosis; Hepatomegaly; Hyperinsulinemia; Hypogonadism; Hypoplasia of penis; Hypoplasia of the capital femoral epiphysis; Infantile onset; Intellectual disability; Keratoconus; Micromelia; Muscular hypotonia; Narrow chest; Nephronophthisis; Nephropathy; Nystagmus; Obesity; Ophthalmoplegia; Optic atrophy; Photophobia; Progressive night blindness; Renal cyst; Renal dysplasia; Respiratory insufficiency; Rod-cone dystrophy; Seizures; Sensorineural hearing impairment; Severe visual impairment; Short femoral neck; Short foot; Short phalanx of finger; Short stature; Short thorax; Skeletal dysplasia; Stage 5 chronic kidney disease; Visual loss; Wide nasal bridgeHeterotaxy ; Short-Rib Thoracic Dysplasia
IMPDH17q32.1100%gene with protein product146690RP10Abnormal electroretinogram; Abnormality of neuronal migration; Abnormality of retinal pigmentation; Abnormality of the optic disc; Abnormality of the retinal vasculature; Abnormality of the testis; Anteverted nares; Aplasia/Hypoplasia of the cerebellar vermis; Atypical scarring of skin; Autosomal dominant inheritance; Blindness; Bone spicule pigmentation of the retina; Cataract; Conductive hearing impairment; Constriction of peripheral visual field; Encephalocele; Glaucoma; Hemiplegia/hemiparesis; Hyperinsulinemia; Hypogonadism; Hypoplasia of penis; Infantile onset; Intellectual disability; Keratoconus; Muscular hypotonia; Nyctalopia; Nystagmus; Obesity; Ophthalmoplegia; Optic atrophy; Photophobia; Progressive night blindness; Rod-cone dystrophy; Seizures; Sensorineural hearing impairment; Severe visual impairment; Undetectable light- and dark-adapted electroretinogram; Visual impairment; Wide nasal bridge
IQCB13q13.3399.95%gene with protein product609237Abnormal electroretinogram; Abnormality of neuronal migration; Abnormality of retinal pigmentation; Abnormality of the optic disc; Aplasia/Hypoplasia of the cerebellar vermis; Autosomal recessive inheritance; Cataract; Encephalocele; Global developmental delay; Hemiplegia/hemiparesis; Heterogeneous; Hypertension; Keratoconus; Muscular hypotonia; Nephronophthisis; Nystagmus; Premature ovarian insufficiency; Progressive visual loss; Retinal dystrophy; Rod-cone dystrophy; Seizures; Severe visual impairment; Short stature; Stage 5 chronic kidney disease; Visual impairment
KCNJ132q37.1100%gene with protein product603208Abnormal electroretinogram; Abnormality of neuronal migration; Abnormality of retinal pigmentation; Abnormality of the optic disc; Aplasia/Hypoplasia of the cerebellar vermis; Autosomal dominant inheritance; Autosomal recessive inheritance; Cataract; Encephalocele; Hemiplegia/hemiparesis; Keratoconus; Muscular hypotonia; Nyctalopia; Nystagmus; Optic disc pallor; Photophobia; Reduced visual acuity; Seizures; Severe visual impairment; Visual impairment; Vitreoretinal degeneration
LCA56q14.199.85%gene with protein product611408C6orf152Abnormal electroretinogram; Abnormality of neuronal migration; Abnormality of retinal pigmentation; Abnormality of the optic disc; Aplasia/Hypoplasia of the cerebellar vermis; Autosomal recessive inheritance; Cataract; Encephalocele; Hemiplegia/hemiparesis; Hypermetropia; Keratoconus; Muscular hypotonia; Nystagmus; Seizures; Severe visual impairment; Undetectable electroretinogram; Visual impairment
LRAT4q32.1100%gene with protein product604863Abnormal electroretinogram; Abnormality of neuronal migration; Abnormality of retinal pigmentation; Abnormality of the optic disc; Abnormality of the retinal vasculature; Abnormality of the testis; Anteverted nares; Aplasia/Hypoplasia of the cerebellar vermis; Atypical scarring of skin; Autosomal recessive inheritance; Blindness; Cataract; Conductive hearing impairment; Congenital blindness; Constriction of peripheral visual field; Decreased light- and dark-adapted electroretinogram amplitude; Encephalocele; Falls; Glaucoma; Hemiplegia/hemiparesis; Hyperinsulinemia; Hypogonadism; Hypoplasia of penis; Intellectual disability; Keratoconus; Muscular hypotonia; Nyctalopia; Nystagmus; Obesity; Ophthalmoplegia; Optic atrophy; Optic disc pallor; Pallor; Photophobia; Progressive night blindness; Reduced visual acuity; Rod-cone dystrophy; Seizures; Sensorineural hearing impairment; Severe visual impairment; Undetectable electroretinogram; Wide nasal bridge
NMNAT11p36.22100%gene with protein product608700LCA9Abnormal electroretinogram; Abnormality of neuronal migration; Abnormality of retinal pigmentation; Abnormality of the optic disc; Aplasia/Hypoplasia of the cerebellar vermis; Attenuation of retinal blood vessels; Autosomal recessive inheritance; Cataract; Encephalocele; Hemiplegia/hemiparesis; Hypermetropia; Keratoconus; Macular coloboma; Muscular hypotonia; Nystagmus; Optic atrophy; Optic disc pallor; Seizures; Severe visual impairment
PAX611p1399.98%gene with protein product607108AN2Abnormal best corrected visual acuity test; Abnormality of movement; Abnormality of retinal pigmentation; Abnormality of the optic disc; Abnormality of the vagina; Abnormality of vision; Amblyopia; Aniridia; Anterior synechiae of the anterior chamber; Aplasia/Hypoplasia of the iris; Aplasia/Hypoplasia of the macula; Ataxia; Autosomal dominant inheritance; Autosomal recessive inheritance; Cataract; Central opacification of the cornea; Cerebellar hypoplasia; Chorioretinal coloboma; Congenital glaucoma; Congenital nystagmus; Contiguous gene syndrome; Corneal opacity; Cryptorchidism; Displacement of the external urethral meatus; EEG abnormality; Everted lower lip vermilion; Generalized hyperpigmentation; Glaucoma; Global developmental delay; Hearing abnormality; Hypoplasia of the corpus callosum; Hypoplasia of the fovea; Hypoplasia of the iris; Hypospadias; Intellectual disability; Keratitis; Mask-like facies; Microcephaly; Micrognathia; Motor delay; Muscular hypotonia; Nephroblastoma; Nystagmus; Opacification of the corneal stroma; Optic atrophy; Optic disc hypoplasia; Optic nerve aplasia; Optic nerve coloboma; Optic nerve hypoplasia; Peripheral vitreous opacities; Peters anomaly; Postural tremor; Presenile cataracts; Pseudopapilledema; Ptosis; Reduced visual acuity; Retinal detachment; Scanning speech; Short stature; Slurred speech; Somatic mutation; Strabismus; Streak ovary; Subcapsular cataract; Thinning of Descemet membrane; Visual impairment; Visual loss
PCYT1A3q2999.99%gene with protein product123695PCYT1Abnormal electroretinogram; Abnormality of color vision; Abnormality of macular pigmentation; Abnormality of neuronal migration; Abnormality of retinal pigmentation; Abnormality of the optic disc; Abnormality of the ribs; Aplasia/Hypoplasia of the cerebellar vermis; Astigmatism; Autosomal recessive inheritance; Bowing of the long bones; Brachydactyly; Cataract; Cone/cone-rod dystrophy; Coxa vara; Cupped ribs; Decreased hip abduction; Dental malocclusion; Encephalocele; Femoral bowing; Hemiplegia/hemiparesis; High hypermetropia; Hyperlordosis; Hypoplastic inferior ilia; Iris hypopigmentation; Joint stiffness; Keratoconus; Large central visual field defect; Metaphyseal cupping; Metaphyseal irregularity; Metaphyseal widening; Muscular hypotonia; Myopia; Narrow greater sacrosciatic notches; Nyctalopia; Nystagmus; Ovoid vertebral bodies; Peripheral visual field loss; Photophobia; Platyspondyly; Postnatal growth retardation; Progressive visual loss; Recurrent otitis media; Rhizomelia; Scoliosis; Seizures; Severe platyspondyly; Severe short stature; Severe visual impairment; Short finger; Short metacarpal; Spondylometaphyseal dysplasia; Tibial bowing; Visual loss
RD31q32.3100%gene with protein product180040C1orf36Abnormal electroretinogram; Abnormality of macular pigmentation; Abnormality of neuronal migration; Abnormality of retinal pigmentation; Abnormality of the optic disc; Aplasia/Hypoplasia of the cerebellar vermis; Autosomal recessive inheritance; Cataract; Congenital blindness; Encephalocele; Hemiplegia/hemiparesis; Keratoconus; Muscular hypotonia; Nystagmus; Seizures; Severe visual impairment
RDH1214q24.1100%gene with protein product608830Abnormal electroretinogram; Abnormality of neuronal migration; Abnormality of retinal pigmentation; Abnormality of the optic disc; Abnormality of the retinal vasculature; Abnormality of the testis; Anteverted nares; Aplasia/Hypoplasia of the cerebellar vermis; Atypical scarring of skin; Autosomal recessive inheritance; Blindness; Cataract; Conductive hearing impairment; Encephalocele; Glaucoma; Hemiplegia/hemiparesis; Hyperinsulinemia; Hypogonadism; Hypoplasia of penis; Intellectual disability; Keratoconus; Muscular hypotonia; Nystagmus; Obesity; Ophthalmoplegia; Optic atrophy; Photophobia; Progressive night blindness; Retinal dystrophy; Seizures; Sensorineural hearing impairment; Severe visual impairment; Wide nasal bridge
RPE651p31.3100%gene with protein product180069RP20Abnormal electroretinogram; Abnormality of neuronal migration; Abnormality of retinal pigmentation; Abnormality of the optic disc; Abnormality of the retinal vasculature; Abnormality of the testis; Anteverted nares; Aplasia/Hypoplasia of the cerebellar vermis; Attenuation of retinal blood vessels; Atypical scarring of skin; Autosomal recessive inheritance; Blindness; Cataract; Cerebellar vermis hypoplasia; Conductive hearing impairment; Decreased light- and dark-adapted electroretinogram amplitude; Encephalocele; Eye poking; Fundus atrophy; Glaucoma; Hemiplegia/hemiparesis; Hyperinsulinemia; Hypogonadism; Hypoplasia of penis; Intellectual disability; Keratoconus; Muscular hypotonia; Nyctalopia; Nystagmus; Obesity; Ophthalmoplegia; Optic atrophy; Photophobia; Pigmentary retinopathy; Progressive night blindness; Reduced visual acuity; Rod-cone dystrophy; Seizures; Sensorineural hearing impairment; Severe visual impairment; Wide nasal bridge
RPGRIP114q11.299.98%gene with protein product605446RPGRIPAbnormal chorioretinal morphology; Abnormal electroretinogram; Abnormality of color vision; Abnormality of neuronal migration; Abnormality of retinal pigmentation; Abnormality of the optic disc; Aplasia/Hypoplasia of the cerebellar vermis; Aplasia/Hypoplasia of the iris; Attenuation of retinal blood vessels; Autosomal recessive inheritance; Cataract; Cleft palate; Cone/cone-rod dystrophy; Congenital hepatic fibrosis; Cryptorchidism; Depressed nasal ridge; Encephalocele; Full cheeks; Hemiplegia/hemiparesis; High hypermetropia; Hypertelorism; Keratoconus; Lobar holoprosencephaly; Low-set, posteriorly rotated ears; Macular degeneration; Microcephaly; Microcornea; Micrognathia; Microphthalmia; Multicystic kidney dysplasia; Muscular hypotonia; Nyctalopia; Nystagmus; Oligohydramnios; Optic atrophy; Pendular nystagmus; Photophobia; Postaxial foot polydactyly; Postaxial hand polydactyly; Reduced visual acuity; Sclerocornea; Seizures; Severe visual impairment; Sloping forehead; Talipes; Undetectable electroretinogram; Undetectable light- and dark-adapted electroretinogram; Visual impairmentHeterotaxy
SPATA714q31.399.99%gene with protein product609868LCA3Abnormal electroretinogram; Abnormality of neuronal migration; Abnormality of retinal pigmentation; Abnormality of the optic disc; Abnormality of the retinal vasculature; Abnormality of the testis; Anteverted nares; Aplasia/Hypoplasia of the cerebellar vermis; Atypical scarring of skin; Autosomal recessive inheritance; Blindness; Cataract; Conductive hearing impairment; Constriction of peripheral visual field; Encephalocele; Glaucoma; Hemiplegia/hemiparesis; Hyperinsulinemia; Hypogonadism; Hypoplasia of penis; Intellectual disability; Keratoconus; Muscular hypotonia; Nystagmus; Obesity; Ophthalmoplegia; Optic atrophy; Photophobia; Progressive night blindness; Seizures; Sensorineural hearing impairment; Severe visual impairment; Wide nasal bridge
TULP16p21.31100%gene with protein product602280RP14Abnormal electroretinogram; Abnormality of color vision; Abnormality of neuronal migration; Abnormality of retinal pigmentation; Abnormality of the optic disc; Abnormality of the retinal vasculature; Abnormality of the testis; Anteverted nares; Aplasia/Hypoplasia of the cerebellar vermis; Atypical scarring of skin; Autosomal recessive inheritance; Blindness; Cataract; Conductive hearing impairment; Congenital nystagmus; Constriction of peripheral visual field; Encephalocele; Glaucoma; Hemiplegia/hemiparesis; Hyperinsulinemia; Hypogonadism; Hypoplasia of penis; Impaired smooth pursuit; Intellectual disability; Keratoconus; Muscular hypotonia; Myopia; Nyctalopia; Nystagmus; Obesity; Ophthalmoplegia; Optic atrophy; Optic disc pallor; Photophobia; Pigmentary retinopathy; Progressive night blindness; Retinal degeneration; Rod-cone dystrophy; Seizures; Sensorineural hearing impairment; Severe visual impairment; Slow pupillary light response; Visual impairment; Wide nasal bridge


The gene coverage data provided by GeneDx represent an estimate based on previous results, but the specific sequencing coverage data for the genes selected may vary from individual to individual, and cannot be predicted exactly. Changes to an approved gene list can only be made by contacting GeneDx directly at 888-729-1206 and asking to speak with a member of our Whole Exome Sequencing Laboratory.


  SUGGESTED CUSTOM SLICES  

Customize below OR enter Suggested Slice ID on printed requisition form
(e.g. 706 XomeDxSlice - Slice ID: CS-Albinism).

Suggested Slice IDSuggested Gene List Name
CS-AlbinismAlbinism
CS-AAAplastic Anemia
CS-AutoImmuneAutoimmune Disorders
CS-BBSBardet-Biedl Syndrome
CS-BMFBone Marrow Failure Syndromes
CS-CVIDCommon Variable Immune Deficiency
CS-CKUTCongenital Kidney and Urinary Tract (CKUT) Anomalies
CS-DSDDisorders of Sex Development
CS-EDEctodermal Dysplasia
CS-FAFanconi Anemia
CS-AnemiaHemolytic Anemia
CS-HeterotaxyHeterotaxy
CS-IBDInflammatory Bowel Disease
CS-MaleInfMale Infertility
CS-WWSMuscular dystropy-dystroglycanopathy (Walker-Warburg)
CS-NephroticNephrotic Syndrome
CS-ObesityObesity
CS-PPKCIPalmoplantar keratoderma plus congenital ichthyosis
CS-Primary ImmunodefPrimary Immunodeficiency
CS-RhabdoRhabdomyolysis
CS-SRTDShort-Rib Thoracic Dysplasia
CS-VACTERLVACTERL Association
CS-WSWaardenburg Syndrome