The diagnostic workup of ASD patients is challenging and complex. In February of 2008, the American College of Medical Genetics endorsed a practical, step-wise approach to diagnosing the genetic causes of autism and related disorders. Based on these recommendations, GeneDx has developed AutismDx, a comprehensive tiered genetic testing approach tailored to the clinical characteristics of a patient with autism or ASD.
AutismDx combines (1) genome-wide microarray analysis, (2) gene sequencing, and (3) deletion/duplication testing to identify the most common genetic causes of ASD in patients in whom a diagnosis of Fragile X has already been excluded. The following components are included:
- GenomeDx microarray v.3: Custom designed, high-resolution, genome-wide aCGH analysis with 105,000 oligonucleotide probes. Very high probe density in ~30 chromosomal regions associated with autism susceptibility (on average 1 probe every 5-10 kb) and excellent resolution across the remainder of the genome (on average 1 probe every 35kb), including all loci for >140 microdeletion/duplication syndromes.
- PTEN: Bi-directional sequence analysis of the coding exons 1-9 and the core promoter region; Deletion/duplication testing
- MECP2: Bi-directional sequence analysis of the 4 exons of the gene; Deletion/duplication testing
- CDKL5: Bi-directional sequence analysis of the entire coding region
Based on a patient’s clinical presentation, AutismDx includes 3 different tiered testing options to ensure the highest possible diagnostic yield and most cost-effective testing strategy:
Panel 1: for ASD patients with macrocephaly
Panel 2: for ASD patients with normal or small head size
Panel 3: “á la carte” gene testing for patients with syndromic autism or specific suspected genetic syndrome(s)